RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RGS16O15492 202 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 HNRNPRO43390 633 aaKnown RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 ERAL1O75616 437 aaKnown RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 OR6B1O95007 311 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 IL3P08700 152 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 CPMP14384 443 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 CREB1P16220 341 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 SERPINB3P29508 390 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 ALDH3A1P30838 453 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 KCNK10P57789 538 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 TRA2BP62995 288 aaKnown RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 RAE1P78406 368 aaKnown RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF750Q32MQ0 723 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 SPDYAQ5MJ70 313 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 SLC29A4Q7RTT9 530 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 MCEMP1Q8IX19 187 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 CDC26Q8NHZ8 85 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 NUBPLQ8TB37 319 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 TM4SF18Q96CE8 201 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 TSPAN10Q9H1Z9 355 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-228ENST00000618469 CXorf21Q9HAI6 301 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 SENP1Q9P0U3 644 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 ITGB1BP2Q9UKP3 347 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 OSGIN2Q9Y236 505 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 FIS1Q9Y3D6 152 aa14.81□□□□□ -0.04
BRCA1-228ENST00000618469 ASPDHA6ND91 283 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 ZG16O60844 167 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 UNC5CO95185 931 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 TUBBP07437 444 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 CT62P0C5K7 136 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 UROSP10746 265 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF24P17028 368 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 NT5EP21589 574 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 SSTR4P31391 388 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 GALNSP34059 522 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 MEOX1P50221 254 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 XKP51811 444 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 GPR85P60893 370 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 ALDH6A1Q02252 535 aaKnown RBP14.8□□□□□ -0.04
BRCA1-228ENST00000618469 CEP85LQ5SZL2 805 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 FAM180BQ6P0A1 224 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 IL20RBQ6UXL0 311 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 GFRALQ6UXV0 394 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 MDGA2Q7Z553 956 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 GPALPP1Q8IXQ4 340 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 CPSF7Q8N684 471 aaKnown RBP14.8□□□□□ -0.04
BRCA1-228ENST00000618469 ZBTB9Q96C00 473 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 TRMOQ9BU70 441 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 CENPHQ9H3R5 247 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 TIMMDC1Q9NPL8 285 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 PFDN4Q9NQP4 134 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 HEY2Q9UBP5 337 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 SEC14L3Q9UDX4 400 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 CES1P1Q9UKY3 287 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 DLGAP4Q9Y2H0 992 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
BRCA1-228ENST00000618469 SERTM1A2A2V5 107 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 PRSS44E7EML9 344 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 AZIN1O14977 448 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF354AO60765 605 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 CLPSP04118 112 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 CHRNGP07510 517 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 SNRPB2P08579 225 aaKnown RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 PORP16435 677 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 PTGER1P34995 402 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 FEN1P39748 380 aaKnown RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 RFC3P40938 356 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 SLC37A1P57057 533 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 ZNF763Q0D2J5 394 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 EBPQ15125 230 aaKnown RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 OPN5Q6U736 354 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 ZCCHC23Q6ZST2 131 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 PSD4Q8NDX1 1056 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 SLC22A8Q8TCC7 542 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 ZIM3Q96PE6 472 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 BRINP2Q9C0B6 783 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 WWTR1Q9GZV5 400 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 UTS2RQ9UKP6 389 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 POLR3HQ9Y535 204 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-228ENST00000618469 CSMD2Q7Z408 3487 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 ADGRG4Q8IZF6 3080 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 PDZD2O15018 2839 aa14.79□□□□□ -0.04
BRCA1-228ENST00000618469 OR6C76A6NM76 312 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 NPIPA5E9PKD4 350 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 TYROBPO43914 113 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 PEX1O43933 1283 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 NPHS1O60500 1241 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 RSL1D1O76021 490 aaKnown RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 ANXA4P09525 319 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 CSNK2A2P19784 350 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-228ENST00000618469 DUSP2Q05923 314 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 MPEG1Q2M385 716 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 GALNT18Q6P9A2 607 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 RTL4Q6ZR62 310 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 SULF2Q8IWU5 870 aa14.78□□□□□ -0.04
BRCA1-228ENST00000618469 SLC34A3Q8N130 599 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms