RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZNF681Q96N22 645 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 DOHHQ9BU89 302 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ASPSCR1Q9BZE9 553 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SOHLH2Q9NX45 425 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ADPRHL2Q9NX46 363 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PDP1Q9P0J1 537 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 RPS6KA6Q9UK32 745 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 BAG5Q9UL15 447 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ENTPD4Q9Y227 616 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SAMHD1Q9Y3Z3 626 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 PCDHGA2Q9Y5H1 932 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 RNF215Q9Y6U7 377 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 MAU2Q9Y6X3 613 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TMEM131Q92545 1883 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 C5orf58C9J3I9 102 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TOR1BO14657 336 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 B3GALT2O43825 422 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SLC28A2O43868 658 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FGF17O60258 216 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 JRKO75564 520 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PIAS2O75928 621 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 OR6B1O95007 311 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TFPTP0C1Z6 253 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PPIBP23284 216 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 MPIP34949 423 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ALDH3A2P51648 485 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 AFF3P51826 1226 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 DAG1Q14118 895 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SLC36A3Q495N2 470 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 IQCCQ4KMZ1 466 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 MCATQ8IVS2 390 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 DHRSXQ8N5I4 330 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CAMKVQ8NCB2 501 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SRFBP1Q8NEF9 429 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 OR7G2Q8NG99 324 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 C10orf90Q96M02 699 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 AMBRA1Q9C0C7 1298 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SRA1Q9HD15 236 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 RLIMQ9NVW2 624 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 NDUFAF4Q9P032 175 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ZNF639Q9UID6 485 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 POMT2Q9UKY4 750 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CORO2BQ9UQ03 480 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ZNF780BQ9Y6R6 833 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PATE3B3GLJ2 98 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SMIM10L1P0DMW3 83 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 NR2F1P10589 423 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PCSK2P16519 638 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CSNK2A2P19784 350 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 DAPP51397 102 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FOXL2P58012 376 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FADDQ13158 208 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PUM1Q14671 1186 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEK3-207ENST00000617054 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 IRAK1BP1Q5VVH5 260 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CWF19L1Q69YN2 538 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 ZC3H14Q6PJT7 736 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 Q6ZPB1 254 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 DGAT2L6Q6ZPD8 337 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ABHD13Q7L211 337 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SATL1Q86VE3 508 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 LACC1Q8IV20 430 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 EID3Q8N140 333 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 C19orf47Q8N9M1 422 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 OR52E4Q8NGH9 312 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 NT5CQ8TCD5 201 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SLC9A6Q92581 669 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SGCDQ92629 289 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 UBE2FQ969M7 185 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TBC1D20Q96BZ9 403 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SDCCAG3Q96C92 435 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ANAPC16Q96DE5 110 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SMIM10Q96HG1 83 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 COL21A1Q96P44 957 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TREX2Q9BQ50 279 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 SPRTNQ9H040 489 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CXorf56Q9H5V9 222 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 YY1AP1Q9H869 796 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TAS2R7Q9NYW3 318 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 TMEM184BQ9Y519 407 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 ENTPD2Q9Y5L3 495 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 C19orf67A6NJJ6 358 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 LMO7DNF2Z398 122 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 FRS3O43559 492 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 FCMRO60667 390 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 SEMA7AO75326 666 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 F12P00748 615 aaPredicted RBP7.32□□□□□ -1.24
NEK3-207ENST00000617054 SEMG1P04279 462 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 LINGO3P0C6S8 592 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 ARAFP10398 606 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 PTNP21246 168 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 SOX18P35713 384 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 BUD31P41223 144 aaPredicted RBP7.32□□□□□ -1.24
NEK3-207ENST00000617054 MAGEA2P43356 314 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 CDH12P55289 794 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 BNC1Q01954 994 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 CFHR1Q03591 330 aa7.32□□□□□ -1.24
NEK3-207ENST00000617054 EXOSC7Q15024 291 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms