RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 HIST1H1TP22492 207 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 PSMB5P28074 263 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ALDH3A2P51648 485 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 PYDC2Q56P42 97 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RAET1LQ5VY80 246 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 FAM180AQ6UWF9 173 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 LIMS2Q7Z4I7 341 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC15A3Q8IY34 581 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 OR10Q1Q8NGQ4 319 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CNDP2Q96KP4 475 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ADAD1Q96M93 576 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CUTCQ9NTM9 273 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 POLR2AP24928 1970 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RNASET2O00584 256 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 TRMUO75648 421 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 FARS2O95363 451 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 LHCGRP22888 699 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RPS26P62854 115 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CYP27C1Q4G0S4 372 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 DCAF12Q5T6F0 453 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 TRIM63Q969Q1 353 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 TP53INP1Q96A56 240 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 UBXN10Q96LJ8 280 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 IL4I1Q96RQ9 567 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 POLDIP3Q9BY77 421 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ADAM29Q9UKF5 820 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 VSTM2BA6NLU5 285 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ANHXE9PGG2 379 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 NPIPA2E9PIF3 369 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 NPIPA3F8WFD2 350 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 PDCD5O14737 125 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 PROM1O43490 865 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 POU2F2P09086 479 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ETS2P15036 469 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 OR1E2P47887 323 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 GFOD2Q3B7J2 385 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 GGTA1PQ4G0N0 100 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 RBM48Q5RL73 367 aaKnown RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 PERM1Q5SV97 790 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 METTL25Q8N6Q8 603 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 LKAAEAR1Q8TD35 194 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 UBTD2Q8WUN7 234 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 MRGPRX1Q96LB2 322 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF559Q9BR84 538 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 YTHDF1Q9BYJ9 559 aaKnown RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ACPTQ9BZG2 426 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 C1GALT1Q9NS00 363 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 STARD5Q9NSY2 213 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 CUEDC1Q9NWM3 386 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 RGPD4Q7Z3J3 1758 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 H0YGG7 62 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 FOXE1O00358 373 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 KHDRBS3O75525 346 aaKnown RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 NADKO95544 446 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF20P17024 532 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 SDC1P18827 310 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 IMPA1P29218 277 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC6A9P48067 706 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ARF3P61204 181 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 IL18R1Q13478 541 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF676Q8N7Q3 588 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 CLEC1AQ8NC01 280 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 FANK1Q8TC84 345 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 DOK4Q8TEW6 326 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 OMA1Q96E52 524 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM19Q96HH6 336 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ABCB10Q9NRK6 738 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 RHCGQ9UBD6 479 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 ITGB1BP2Q9UKP3 347 aa8.96□□□□□ -0.97
CLTCL1-208ENST00000615606 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 PDLIM1O00151 329 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 TAF4O00268 1085 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 SLCO2B1O94956 709 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 HSD11B2P80365 405 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 VLDLRP98155 873 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 E2F1Q01094 437 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 HSF2Q03933 536 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 EFR3AQ14156 821 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 C14orf28Q4W4Y0 310 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 PAMR1Q6UXH9 720 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 KRT77Q7Z794 578 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 ARL14Q8N4G2 192 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 FAM86B1Q8N7N1 296 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 ZFPM2Q8WW38 1151 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 PKP2Q99959 881 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 TCF7L1Q9HCS4 588 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 UBAP1Q9NZ09 502 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 PCDHB14Q9Y5E9 798 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 SDK1Q7Z5N4 2213 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 TLCD2A6NGC4 264 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 PSIP1O75475 530 aaKnown RBP8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 SCRG1O75711 98 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 MMP2P08253 660 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 ETFAP13804 333 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 RHCEP18577 417 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 NR0B1P51843 470 aaKnown RBP8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 FOXA1P55317 472 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 OR2B6P58173 313 aa8.96□□□□□ -0.98
CLTCL1-208ENST00000615606 TCEAL6Q6IPX3 200 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms