RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 A0A1W2PNU3 283 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 CLIC1O00299 241 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ARPC2O15144 300 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ONECUT2O95948 504 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 C1QCP02747 245 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 UQCRC2P22695 453 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 PTGER1P34995 402 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SOAT1P35610 550 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 VHLP40337 213 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 STX4Q12846 297 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ZC3H7AQ8IWR0 971 aaKnown RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 WDR36Q8NI36 951 aaKnown RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 PSMA8Q8TAA3 256 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ZFP90Q8TF47 636 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SLC35A5Q9BS91 424 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 PIF1Q9H611 641 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 TPT1P8Q9HAU6 139 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SIRT3Q9NTG7 399 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SEC16AO15027 2179 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 TGFBR3LH3BV60 316 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 MAOAP21397 527 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 AGXTP21549 392 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 LTB4RQ15722 352 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SPDYE7PQ495Y7 208 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 WLSQ5T9L3 541 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 MFSD4BQ5TF39 518 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 OVCH1Q7RTY7 1134 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 TMPRSS12Q86WS5 348 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 LILRA2Q8N149 483 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 CACTIN-AS1Q8N1I8 211 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 C10orf111Q8N326 155 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 OR5AK3PQ8NH89 298 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 LRFN5Q96NI6 719 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 DPH2Q9BQC3 489 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ALOXE3Q9BYJ1 711 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 ASPSCR1Q9BZE9 553 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 MUC13Q9H3R2 512 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 SEMA3GQ9NS98 782 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 IFT80Q9P2H3 777 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-213ENST00000613758 CTSFQ9UBX1 484 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 MMACHCQ9Y4U1 282 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
TMEM254-213ENST00000613758 AQP12BA6NM10 295 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 EVPLLA8MZ36 301 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 KLK3P07288 261 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 SLC35E2P0CK97 266 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 NCK1P16333 377 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CHI3L1P36222 383 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CCT3P49368 545 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 GZMMP51124 257 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 OCA2Q04671 838 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 MINDY4Q4G0A6 757 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 LCN10Q6JVE6 187 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 SPPL2CQ8IUH8 684 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 AQP12AQ8IXF9 295 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PRSS58Q8IYP2 241 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PTCHD1Q96NR3 888 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ECSITQ9BQ95 431 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 TGIF2Q9GZN2 237 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 NECTIN3Q9NQS3 549 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CDV3Q9UKY7 258 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 C15orf41Q9Y2V0 281 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 IGLV3-12A0A075B6K2 115 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 TCRBV5S2A0A599 114 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CASQ2O14958 399 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ATP1B1P05026 303 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PPIBP23284 216 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 SOX11P35716 441 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 LAPTM4BQ86VI4 370 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 OR10A6Q8NH74 314 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 FAM110BQ8TC76 370 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 STT3BQ8TCJ2 826 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PNPT1Q8TCS8 783 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 KAT2AQ92830 837 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 PPWD1Q96BP3 646 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ELP4Q96EB1 424 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 KAT8Q9H7Z6 458 aaKnown RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-213ENST00000613758 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ACSL6Q9UKU0 697 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 SATB2Q9UPW6 733 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 AP3M1Q9Y2T2 418 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 CLDN16Q9Y5I7 305 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
TMEM254-213ENST00000613758 ZNF292O60281 2723 aa12.89□□□□□ -0.35
TMEM254-213ENST00000613758 RNF103-CHMP3A0A140T963 221 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms