RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RIPPLY2Q5TAB7 128 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 KLC3Q6P597 504 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 TMEM200AQ86VY9 491 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 LIX1LQ8IVB5 337 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 NEIL3Q8TAT5 605 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 MRRFQ96E11 262 aaKnown RBP16.34■□□□□ 0.21
SSBP1-215ENST00000612337 DOHHQ9BU89 302 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 FREM3P0C091 2139 aa16.33■□□□□ 0.21
SSBP1-215ENST00000612337 ANKRD33BA6NCL7 494 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 CAPN14A8MX76 684 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 SEMA3DO95025 777 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 SIX3O95343 332 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-215ENST00000612337 CLDN9O95484 217 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 SERPINB8P50452 374 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 NEK2P51955 445 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 ETF1P62495 437 aaKnown RBP16.33■□□□□ 0.2
SSBP1-215ENST00000612337 TBCELQ5QJ74 424 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 OR52E8Q6IFG1 317 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-215ENST00000612337 TP53INP1Q96A56 240 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-215ENST00000612337 SERPINI1Q99574 410 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 SLC6A15Q9H2J7 730 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 CXorf21Q9HAI6 301 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 CPSF2Q9P2I0 782 aaKnown RBP16.33■□□□□ 0.2
SSBP1-215ENST00000612337 B4GALT7Q9UBV7 327 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 L3MBTL1Q9Y468 752 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 VPS13CQ709C8 3753 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 AKAP6Q13023 2319 aa16.33■□□□□ 0.2
SSBP1-215ENST00000612337 C2orf92A0A1B0GVN3 265 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 TP53I11O14683 189 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 TRIM3O75382 744 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ZWINTO95229 277 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ALDOAP04075 364 aaKnown RBP16.32■□□□□ 0.2
SSBP1-215ENST00000612337 CD1EP15812 388 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 TYK2P29597 1187 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 DLX5P56178 289 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 RPS6KA2Q15349 733 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 UAP1Q16222 522 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-215ENST00000612337 TECRLQ5HYJ1 363 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ZNF572Q7Z3I7 529 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ULK2Q8IYT8 1036 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 LIX1Q8N485 282 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 DIO2Q92813 273 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 UCN3Q969E3 161 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 NOL11Q9H8H0 719 aaKnown RBP16.32■□□□□ 0.2
SSBP1-215ENST00000612337 IKBKGQ9Y6K9 419 aa16.32■□□□□ 0.2
SSBP1-215ENST00000612337 ESYT3A0FGR9 886 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 OR7A17O14581 309 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 PGRMC2O15173 223 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 LRATO95237 230 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 GBAP04062 536 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 GDF1P27539 372 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 PIK3R1P27986 724 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 SSTR4P31391 388 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 TRPC1P48995 793 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 FUT7Q11130 342 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 C10orf62Q5T681 223 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 TMEM198Q66K66 360 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 ARSKQ6UWY0 536 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 SYT10Q6XYQ8 523 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 WDR53Q7Z5U6 358 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 GALNT12Q8IXK2 581 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 PTGR2Q8N8N7 351 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 ATP6V1E2Q96A05 226 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 CDK15Q96Q40 435 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 SECISBP2Q96T21 854 aaKnown RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 ZDHHC18Q9NUE0 388 aa16.31■□□□□ 0.2
SSBP1-215ENST00000612337 TEX10Q9NXF1 929 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 HRNRQ86YZ3 2850 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-215ENST00000612337 A0A1W2PS29 197 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 HSPB2A8KAH6 182 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 DNAJA1P31689 397 aaKnown RBP16.3■□□□□ 0.2
SSBP1-215ENST00000612337 PHBP35232 272 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 ARL1P40616 181 aaPredicted RBP16.3■□□□□ 0.2
SSBP1-215ENST00000612337 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
SSBP1-215ENST00000612337 CCNG1P51959 295 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 FBXW4P57775 412 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 SLC7A5Q01650 507 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 DUSP8Q13202 625 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 HSPB2Q16082 182 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 HLA-DQA1Q5Y7H0 255 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 TMEM64Q6YI46 380 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 SEM1Q6ZVN7 128 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 PLD6Q8N2A8 252 aaKnown RBP16.3■□□□□ 0.2
SSBP1-215ENST00000612337 ZNF615Q8N8J6 731 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 OR4K14Q8NGD5 310 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 SPPL2AQ8TCT8 520 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 ADIPOR1Q96A54 375 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 NTMT1Q9BV86 223 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 VPS11Q9H270 941 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 ACSS3Q9H6R3 686 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 ADAM29Q9UKF5 820 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 TMCO1Q9UM00 188 aa16.3■□□□□ 0.2
SSBP1-215ENST00000612337 NPFFR2Q9Y5X5 522 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms