RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PRKD3O94806 890 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TFPTP0C1Z6 253 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ATP6V1C1P21283 382 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ACP1P24666 158 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SNRPNP63162 240 aaKnown RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SELENOWP63302 87 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FOLH1Q04609 750 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DSG2Q14126 1118 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SERTAD2Q14140 314 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AMZ1Q400G9 498 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF628Q5EBL2 1059 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EXOSC6Q5RKV6 272 aaKnown RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AP1ARQ63HQ0 302 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HMBOX1Q6NT76 420 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DGLUCYQ7Z3D6 616 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ST13P4Q8IZP2 240 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SVOPLQ8N434 492 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EID2Q8N6I1 236 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HORMAD2Q8N7B1 307 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 Q8N9G6 341 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BBS10Q8TAM1 723 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HOXB13Q92826 284 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 UCN3Q969E3 161 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EME1Q96AY2 570 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CTHRC1Q96CG8 243 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF501Q96CX3 271 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF607Q96SK3 696 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NDC1Q9BTX1 674 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DOHHQ9BU89 302 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SPATA5L1Q9BVQ7 753 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ACTRT3Q9BYD9 372 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C19orf53Q9UNZ5 99 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CLCA2Q9UQC9 943 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LRCH1Q9Y2L9 728 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MAP4K5Q9Y4K4 846 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NINQ8N4C6 2090 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 A0A0A6YYC8 382 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 A0A1B0GX78 115 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C5orf58C9J3I9 102 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 I3L1I5 382 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FGF17O60258 216 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 B4GALT2O60909 372 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 COQ9O75208 318 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ONECUT2O95948 504 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AK1P00568 194 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HMGN2P05204 90 aaKnown RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CYC1P08574 325 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HBQ1P09105 142 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NUDT7P0C024 238 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ETS2P15036 469 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MATN1P21941 496 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FEN1P39748 380 aaKnown RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CRISP3P54108 245 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SIM1P81133 766 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DAB2P98082 770 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DUSP2Q05923 314 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MAP4K2Q12851 820 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GRAMD1BQ3KR37 738 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LRRC23Q53EV4 343 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FHL5Q5TD97 284 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PPP4R4Q6NUP7 873 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CDC73Q6P1J9 531 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ENPP6Q6UWR7 440 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TMEM107Q6UX40 140 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 IZUMO2Q6UXV1 221 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KRT73Q86Y46 540 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZC3H7AQ8IWR0 971 aaKnown RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ICA1LQ8NDH6 482 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NUP43Q8NFH3 380 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR9A2Q8NGT5 310 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FBXO30Q8TB52 745 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 IFI44Q8TCB0 444 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SLC38A5Q8WUX1 472 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ANKRD9Q96BM1 317 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NRBF2Q96F24 287 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RDH12Q96NR8 316 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 STACQ99469 402 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SEPHS2Q99611 448 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRRX2Q99811 253 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NUDT22Q9BRQ3 303 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR51I1Q9H343 314 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 THSD1Q9NS62 852 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FGF21Q9NSA1 209 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 STARD5Q9NSY2 213 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DDX18Q9NVP1 670 aaKnown RBP11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 IRAK4Q9NWZ3 460 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PCDHGB3Q9Y5G1 929 aa11.53□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 A0A0G2JPF8 293 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IGHV5-10-1A0A0J9YXX1 117 aa11.52□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CPED1A4D0V7 1026 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms