RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DNASE1L1P49184 302 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 GALNT1Q10472 559 aaPredicted RBP16.71■□□□□ 0.27
CCDC12-208ENST00000603885 SLC22A10Q63ZE4 541 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 LYPD8Q6UX82 237 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 NCCRP1Q6ZVX7 275 aaPredicted RBP16.71■□□□□ 0.27
CCDC12-208ENST00000603885 TAGAPQ8N103 731 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 FAM109AQ8N4B1 249 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 EIF1ADQ8N9N8 165 aaKnown RBP16.71■□□□□ 0.27
CCDC12-208ENST00000603885 FAM13CQ8NE31 585 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 PAQR8Q8TEZ7 354 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 HBEGFQ99075 208 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 STK38LQ9Y2H1 464 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 PCDHA9Q9Y5H5 950 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 ZNF407Q9C0G0 2248 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 EML6Q6ZMW3 1958 aa16.71■□□□□ 0.27
CCDC12-208ENST00000603885 LRBAP50851 2863 aa16.71■□□□□ 0.26
CCDC12-208ENST00000603885 C2orf92A0A1B0GVN3 265 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 GOLGA6L10A6NI86 522 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 MANBAO00462 879 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 CLDN14O95500 239 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 FBXO45P0C2W1 286 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 PORP16435 677 aaPredicted RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 NT5EP21589 574 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 HMOX2P30519 316 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 PRKAA2P54646 552 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 FOXO1Q12778 655 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 CSTF3Q12996 717 aaKnown RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 HLA-DQA1Q5Y7H0 255 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 SLC48A1Q6P1K1 146 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 TMEM251Q8N6I4 163 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 C1orf52Q8N6N3 182 aaKnown RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 LRRN4CLQ8ND94 238 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 METTL6Q8TCB7 284 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 MZB1Q8WU39 189 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 L3HYPDHQ96EM0 354 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 TP63Q9H3D4 680 aaPredicted RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 SH2D2AQ9NP31 389 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 TUBA8Q9NY65 449 aaPredicted RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 CNIH4Q9P003 139 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 VPS29Q9UBQ0 182 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 DCDC2Q9UHG0 476 aa16.7■□□□□ 0.26
CCDC12-208ENST00000603885 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.7■□□□□ 0.26
CCDC12-208ENST00000603885 DNAJC13O75165 2243 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 ULK1O75385 1050 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 IGHG3P01860 377 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 CT62P0C5K7 136 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 PIGAP37287 484 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 MAGEA5P43359 124 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 PKNOX1P55347 436 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 TRA2BP62995 288 aaKnown RBP16.69■□□□□ 0.26
CCDC12-208ENST00000603885 KCNJ2P63252 427 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 FUT7Q11130 342 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 LCP2Q13094 533 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 HYAL4Q2M3T9 481 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 TCHHL1Q5QJ38 904 aaPredicted RBP16.69■□□□□ 0.26
CCDC12-208ENST00000603885 PRAMEF20Q5VT98 475 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 FAM219BQ5XKK7 198 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 TICAM1Q8IUC6 712 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 FBXW8Q8N3Y1 598 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 ZNF441Q8N8Z8 693 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 OR7G1Q8NGA0 311 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 OR10G3Q8NGC4 313 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 TP53INP1Q96A56 240 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 TM4SF18Q96CE8 201 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 FAIM2Q9BWQ8 316 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 OR10A5Q9H207 317 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 COQ3Q9NZJ6 369 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 CES1P1Q9UKY3 287 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 PSME2Q9UL46 239 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 BOKQ9UMX3 212 aaPredicted RBP16.69■□□□□ 0.26
CCDC12-208ENST00000603885 MYO9AB2RTY4 2548 aa16.69■□□□□ 0.26
CCDC12-208ENST00000603885 ABCA12Q86UK0 2595 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CACNA1CQ13936 2221 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CCDC151A5D8V7 595 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 OR14I1A6ND48 311 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CAPN14A8MX76 684 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 NPIPA2E9PIF3 369 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 NPIPA3F8WFD2 350 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 GLRA3O75311 464 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 ERAL1O75616 437 aaKnown RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 ENO1P06733 434 aaKnown RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 NR0B1P51843 470 aaKnown RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 NTRK2Q16620 822 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 TMEM211Q6ICI0 200 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 VWA5B2Q8N398 1253 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 ZNF615Q8N8J6 731 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 GBP7Q8N8V2 638 aaPredicted RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 UBLCP1Q8WVY7 318 aaPredicted RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 SDCCAG3Q96C92 435 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 KLHL29Q96CT2 875 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CCDC126Q96EE4 140 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 SMC6Q96SB8 1091 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 PPCSQ9HAB8 311 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 LIPGQ9Y5X9 500 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CHCHD2Q9Y6H1 151 aaPredicted RBP16.68■□□□□ 0.26
CCDC12-208ENST00000603885 CREBBPQ92793 2442 aa16.68■□□□□ 0.26
CCDC12-208ENST00000603885 ATP6AP2A0A1C7CYW4 349 aa16.67■□□□□ 0.26
CCDC12-208ENST00000603885 A0A1W2PPM1 405 aa16.67■□□□□ 0.26
CCDC12-208ENST00000603885 TP53I11O14683 189 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms