RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 A8MUI8 341 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 K7EM74 188 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 AKAP10O43572 662 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 DPM1O60762 260 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 EDF1O60869 148 aaKnown RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 SLITRK5O94991 958 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 PDGFAP04085 211 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 IFI6P09912 130 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 G6PDP11413 515 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 S1PR1P21453 382 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 NT5EP21589 574 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 DIO3P55073 304 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 MGAT2Q10469 447 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 ZNF267Q14586 743 aaPredicted RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 PTGR1Q14914 329 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 MEP1AQ16819 746 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 FAM47EQ6ZV65 393 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 RIMKLAQ8IXN7 391 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 CCDC116Q8IYX3 515 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 NATD1Q8N6N6 113 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 OR5L2Q8NGL0 311 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 CEP70Q8NHQ1 597 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 SUN3Q8TAQ9 357 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 HAS2Q92819 552 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 GFM2Q969S9 779 aaKnown RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 PPCDCQ96CD2 204 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 BBC3Q96PG8 261 aaPredicted RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 PRPF18Q99633 342 aaKnown RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
RNF40-212ENST00000602784 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 CNTRLQ7Z7A1 2325 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 KALRNO60229 2985 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 BOD1L1Q8NFC6 3051 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 TCP11X1B4DZS4 312 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 HRKO00198 91 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 SCAMP2O15127 329 aaKnown RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 LRATO95237 230 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 NTSP30990 170 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 FRKP42685 505 aaPredicted RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 SLC37A1P57057 533 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 MLF1P58340 268 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 RNF4P78317 190 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 DUSP2Q05923 314 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 SLC9B1Q4ZJI4 515 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 SOWAHCQ53LP3 525 aaPredicted RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 B3GNTL1Q67FW5 361 aaPredicted RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 CAMKMTQ7Z624 323 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 VWA5B2Q8N398 1253 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 ZADH2Q8N4Q0 377 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 ZNF321PQ8N8H1 164 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 NUBPLQ8TB37 319 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 NPAS2Q99743 824 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 SIKE1Q9BRV8 207 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 CNPPD1Q9BV87 410 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 ACSS1Q9NUB1 689 aaPredicted RBP12.9□□□□□ -0.34
RNF40-212ENST00000602784 ATAD3AQ9NVI7 634 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 SH3BP4Q9P0V3 963 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 ERVK-19Q9WJR5 959 aa12.9□□□□□ -0.34
RNF40-212ENST00000602784 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 TMEM200CA6NKL6 621 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 PLOD2O00469 737 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 PDPK1O15530 556 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 PLOD3O60568 738 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 DIAPH2O60879 1101 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 BCAS2O75934 225 aaPredicted RBP12.89□□□□□ -0.35
RNF40-212ENST00000602784 ALDOCP09972 364 aaKnown RBP12.89□□□□□ -0.35
RNF40-212ENST00000602784 CT62P0C5K7 136 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 IDO1P14902 403 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 SOX18P35713 384 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 IDH3AP50213 366 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 MPEG1Q2M385 716 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ZNF628Q5EBL2 1059 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 CPTPQ5TA50 214 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 NXNQ6DKJ4 435 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 FAM180BQ6P0A1 224 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 RNF111Q6ZNA4 994 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 LINC00696Q6ZRV3 163 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ACAD11Q709F0 780 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ZNF615Q8N8J6 731 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ZBED6CLQ96FA7 236 aaPredicted RBP12.89□□□□□ -0.35
RNF40-212ENST00000602784 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 BRINP2Q9C0B6 783 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms