RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SHISA5Q8N114 240 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 ADCY4Q8NFM4 1077 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 OR52E4Q8NGH9 312 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 DUS3LQ96G46 650 aaKnown RBP16.89■□□□□ 0.29
VRK3-225ENST00000601912 SLC35G5Q96KT7 338 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 TMEM38AQ9H6F2 299 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.29
VRK3-225ENST00000601912 AKAP7Q9P0M2 348 aaPredicted RBP16.89■□□□□ 0.29
VRK3-225ENST00000601912 TRPC4Q9UBN4 977 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 AP4S1Q9Y587 144 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 MYO15AQ9UKN7 3530 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 PLOD2O00469 737 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 OR10H2O60403 315 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 SCRG1O75711 98 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 NUDT7P0C024 238 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 BMP2P12643 396 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 NT5EP21589 574 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 SLC7A1P30825 629 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 PTGER1P34995 402 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 PCGF2P35227 344 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 NBL1P41271 181 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 BIKQ13323 160 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 ERV3-1Q14264 604 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 C16orf72Q14CZ0 275 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 LTB4RQ15722 352 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 ZNF630Q2M218 657 aaPredicted RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 C1orf189Q5VU69 101 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 NUP43Q8NFH3 380 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 CANT1Q8WVQ1 401 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 KAT2AQ92830 837 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 RBM18Q96H35 190 aaKnown RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 OCIAD1Q9NX40 245 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 PTGFRNQ9P2B2 879 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 SCN2AQ99250 2005 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 TCRBV5S2A0A599 114 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 H3BNX3 289 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 MATN1P21941 496 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 RPS26P62854 115 aaKnown RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 CCDC157Q569K6 752 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 INTS11Q5TA45 600 aaKnown RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 TNFAIP8L2Q6P589 184 aaPredicted RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 MED25Q71SY5 747 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 SLC30A8Q8IWU4 369 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 C7orf57Q8NEG2 295 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 NETO1Q8TDF5 533 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 MAL2Q969L2 176 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 CLIP3Q96DZ5 547 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 PARD6AQ9NPB6 346 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 CCM2LQ9NUG4 571 aaPredicted RBP16.88■□□□□ 0.29
VRK3-225ENST00000601912 STOML1Q9UBI4 398 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 ANAPC2Q9UJX6 822 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 AURKCQ9UQB9 309 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 MMACHCQ9Y4U1 282 aa16.88■□□□□ 0.29
VRK3-225ENST00000601912 TMEM247A6NEH6 219 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 TMX2-CTNND1H3BSU7 103 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
VRK3-225ENST00000601912 RFPL3O75679 317 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 IFI6P09912 130 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 FGF5P12034 268 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 CCKBRP32239 447 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 KHKP50053 298 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 MAPK10P53779 464 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 MRPS35P82673 323 aaKnown RBP16.87■□□□□ 0.29
VRK3-225ENST00000601912 SCARB2Q14108 478 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 SERTAD2Q14140 314 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 ZNF628Q5EBL2 1059 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 IRAK1BP1Q5VVH5 260 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 PWWP2BQ6NUJ5 590 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 ST13P4Q8IZP2 240 aaPredicted RBP16.87■□□□□ 0.29
VRK3-225ENST00000601912 EID3Q8N140 333 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 HORMAD2Q8N7B1 307 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 OR7G2Q8NG99 324 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 ZNF675Q8TD23 568 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 ALOXE3Q9BYJ1 711 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 MKKSQ9NPJ1 570 aaPredicted RBP16.87■□□□□ 0.29
VRK3-225ENST00000601912 FAM86C1Q9NVL1 165 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 NTMQ9P121 344 aa16.87■□□□□ 0.29
VRK3-225ENST00000601912 A0A087WV62 115 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 MYOCOSA0A1B0GUC4 107 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 UPK1AO00322 258 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 HYAL3O43820 417 aaPredicted RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 HMGN2P05204 90 aaKnown RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 KDELR2P33947 212 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 SESN3P58005 492 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 BTG2P78543 158 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 IGLV3-21P80748 117 aaPredicted RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 CDK6Q00534 326 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 LASP1Q14847 261 aaKnown RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 ZC3H7AQ8IWR0 971 aaKnown RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 OR2L13Q8N349 312 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 DGAT2Q96PD7 388 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 MS4A4EQ96PG1 132 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 CMKLR1Q99788 373 aa16.86■□□□□ 0.29
VRK3-225ENST00000601912 PELOQ9BRX2 385 aaKnown RBP16.86■□□□□ 0.29
VRK3-225ENST00000601912 UGT2B28Q9BY64 529 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms