RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 PIWIL3Q7Z3Z3 882 aaKnown RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 CCDC116Q8IYX3 515 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 SPEM1Q8N4L4 309 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TCEANCQ8N8B7 351 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 CLEC1AQ8NC01 280 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 DOHHQ9BU89 302 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TMEM9BQ9NQ34 198 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 SLC6A14Q9UN76 642 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ZNF638Q14966 1978 aaKnown RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 GPR89AB7ZAQ6 455 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 STSP08842 583 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 GPR89BP0CG08 455 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 LAMP1P11279 417 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 RNH1P13489 461 aaKnown RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 CD9P21926 228 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 SLC30A8Q8IWU4 369 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TFAP2CQ92754 450 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TMEM80Q96HE8 168 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 EDEM2Q9BV94 578 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TRPV5Q9NQA5 729 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 MROH6A6NGR9 719 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ELOA3DA6NLF2 546 aaPredicted RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 RPS17P08708 135 aaKnown RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ELOA3BQ3SY89 546 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 CES4AQ5XG92 561 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TMEM207Q6UWW9 146 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 RNF111Q6ZNA4 994 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 SNX29P2Q8IUI4 249 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 FAM217AQ8IXS0 508 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ELOA3Q8NG57 546 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 SNX33Q8WV41 574 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TRNT1Q96Q11 434 aaKnown RBP10.53□□□□□ -0.72
ZNF558-207ENST00000601372 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 TRIB3Q96RU7 358 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ZFYVE21Q9BQ24 234 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 PLCL2Q9UPR0 1127 aa10.53□□□□□ -0.72
ZNF558-207ENST00000601372 ZNF404Q494X3 552 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 HSDL2Q6YN16 418 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 C1orf210Q8IVY1 113 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.72
ZNF558-207ENST00000601372 MRGPRX1Q96LB2 322 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 NAA50Q9GZZ1 169 aaKnown RBP10.52□□□□□ -0.72
ZNF558-207ENST00000601372 SACM1LQ9NTJ5 587 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 RTCAO00442 366 aaKnown RBP10.52□□□□□ -0.72
ZNF558-207ENST00000601372 KLHL22Q53GT1 634 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 CATSPEREQ5SY80 951 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 PGM2L1Q6PCE3 622 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 DAZLQ92904 295 aaKnown RBP10.52□□□□□ -0.72
ZNF558-207ENST00000601372 RFKQ969G6 155 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 TUBA1CQ9BQE3 449 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 TSSK6Q9BXA6 273 aa10.52□□□□□ -0.72
ZNF558-207ENST00000601372 SHC2P98077 582 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 HMBOX1Q6NT76 420 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 FRRS1Q6ZNA5 592 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 LMNTD1Q8N9Z9 388 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 FNDC8Q8TC99 324 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 OR6C1Q96RD1 312 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ATOH8Q96SQ7 321 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ZBTB20Q9HC78 741 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-207ENST00000601372 IL17CQ9P0M4 197 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 CMAHPQ9Y471 501 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 A0A1B0GW55 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L2P0CJ85 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L3P0CJ86 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L4P0CJ87 422 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L5P0CJ88 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L6P0CJ89 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4L7P0CJ90 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 GRK6P43250 576 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 CTSCP53634 463 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 NFATC3Q12968 1075 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 NNATQ16517 81 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 PDSS1Q5T2R2 415 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 OR4C11Q6IEV9 310 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 RETREG3Q86VR2 466 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 CBARPQ8N350 705 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-207ENST00000601372 IFI44Q8TCB0 444 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 LKAAEAR1Q8TD35 194 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 CRB3Q9BUF7 120 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DUX4Q9UBX2 424 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 IKZF2Q9UKS7 526 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ATE1O95260 518 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 BCAP31P51572 246 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 CLDN8P56748 225 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ARG2P78540 354 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 SPEM2Q0P670 501 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 TMEM184CQ9NVA4 438 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 DAPL1A0PJW8 107 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 VILLO15195 856 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ZNF888P0CJ79 500 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-207ENST00000601372 ARNTP27540 789 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 GSTM2P28161 218 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 OMPP47874 163 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 SNTA1Q13424 505 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 PPP1R3BQ86XI6 285 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
ZNF558-207ENST00000601372 METTL25Q8N6Q8 603 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms