RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 C15orf38-AP3S2A0A0A6YYH1 394 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 C2orf92A0A1B0GVN3 265 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 ESYT3A0FGR9 886 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 OR6C76A6NM76 312 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 TRIM3O75382 744 aaPredicted RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 CTAG2O75638 210 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 KRT38O76015 456 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 CT62P0C5K7 136 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 UQCRC1P31930 480 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 ARL1P40616 181 aaPredicted RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 IST1P53990 364 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 CAV1Q03135 178 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 TBL3Q12788 808 aaKnown RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 DUSP8Q13202 625 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 CUL3Q13618 768 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 UAP1Q16222 522 aaPredicted RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 ACSF3Q4G176 576 aaPredicted RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 NUDT13Q86X67 352 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 DND1Q8IYX4 353 aaKnown RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 PRR22Q8IZ63 422 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 TAGAPQ8N103 731 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 LIX1Q8N485 282 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 ZNF441Q8N8Z8 693 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 L3MBTL4Q8NA19 623 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 NAXEQ8NCW5 288 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 TNIP2Q8NFZ5 429 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 RHEBL1Q8TAI7 183 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 WDR20Q8TBZ3 569 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 DIO2Q92813 273 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 REPS1Q96D71 796 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 ZNF597Q96LX8 424 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 GPR78Q96P69 363 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 GPATCH1Q9BRR8 931 aaKnown RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 LIME1Q9H400 295 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 IPPKQ9H8X2 491 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 CXorf21Q9HAI6 301 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 SLC24A3Q9HC58 644 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 B4GALT7Q9UBV7 327 aa9.66□□□□□ -0.86
LSM4-205ENST00000597776 MAP1AP78559 2803 aaPredicted RBP9.66□□□□□ -0.86
LSM4-205ENST00000597776 FAM47E-STBD1D6RA91 191 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 OR7A17O14581 309 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 UGDHO60701 494 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 TRAPPC6AO75865 159 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 ACSL3O95573 720 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 ALDOAP04075 364 aaKnown RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 SLC35E2P0CK97 266 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 BMP5P22003 454 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 KIR2DL3P43628 341 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 ARFIP1P53367 373 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 SLC7A5Q01650 507 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 GUCY2DQ02846 1103 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 CRYZQ08257 329 aaKnown RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 ACAP2Q15057 778 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 RPS6KA2Q15349 733 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 PCBP2Q15366 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
LSM4-205ENST00000597776 NNATQ16517 81 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 TECRLQ5HYJ1 363 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 OR52E8Q6IFG1 317 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 GALNT12Q8IXK2 581 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 PLD6Q8N2A8 252 aaKnown RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 C17orf53Q8N3J3 647 aaPredicted RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 ZNF615Q8N8J6 731 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 PTGR2Q8N8N7 351 aaPredicted RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 OR52B6Q8NGF0 335 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 SPPL2AQ8TCT8 520 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 RILPQ96NA2 401 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 GNRHR2Q96P88 292 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 POLDIP3Q9BY77 421 aaKnown RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 RAB17Q9H0T7 212 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 VPS11Q9H270 941 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 NOL11Q9H8H0 719 aaKnown RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 WDR41Q9HAD4 459 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 CCM2LQ9NUG4 571 aaPredicted RBP9.65□□□□□ -0.86
LSM4-205ENST00000597776 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 QPCTLQ9NXS2 382 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 SLC6A5Q9Y345 797 aa9.65□□□□□ -0.86
LSM4-205ENST00000597776 ZNF469Q96JG9 3925 aaPredicted RBP9.64□□□□□ -0.87
LSM4-205ENST00000597776 ANKRD33BA6NCL7 494 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 HSPB2A8KAH6 182 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 FOXE1O00358 373 aaPredicted RBP9.64□□□□□ -0.87
LSM4-205ENST00000597776 TP53I11O14683 189 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 KLHL2O95198 593 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 CLDN9O95484 217 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 KLK1P06870 262 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 NT5EP21589 574 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 PIK3R1P27986 724 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 TYK2P29597 1187 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 GALNSP34059 522 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 MASP1P48740 699 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 SERPINB8P50452 374 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 CDK9P50750 372 aaKnown RBP9.64□□□□□ -0.87
LSM4-205ENST00000597776 TOMM20Q15388 145 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 HSPB2Q16082 182 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 SGO1Q5FBB7 561 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 DCST1Q5T197 706 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 FNDC7Q5VTL7 733 aa9.64□□□□□ -0.87
LSM4-205ENST00000597776 HLA-DQA1Q5Y7H0 255 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms