RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KIAA0040Q15053 153 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 MPEG1Q2M385 716 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 EIF2S3LQ2VIR3 472 aaKnown RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 PIGGQ5H8A4 983 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 NOXRED1Q6NXP6 359 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CLEC18BQ6UXF7 455 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 GPALPP1Q8IXQ4 340 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CLEC18CQ8NCF0 446 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 NR4A3Q92570 626 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 KLHL29Q96CT2 875 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 CNRIP1Q96F85 164 aaPredicted RBP15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF681Q96N22 645 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 EBPLQ9BY08 206 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 PTGDR2Q9Y5Y4 395 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF780BQ9Y6R6 833 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 POLEQ07864 2286 aa15.5■□□□□ 0.07
SSBP4-204ENST00000597724 ASPDHA6ND91 283 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 A8MVJ9 347 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 BIRC5O15392 142 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 RGS14O43566 566 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 OR6B1O95007 311 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 DHRS4L1P0CG22 281 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 S1PR1P21453 382 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 SSTR4P31391 388 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 SOX3P41225 446 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 TDGF1P3P51864 188 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 DUSP2Q05923 314 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 SRSF1Q07955 248 aaKnown RBP eCLIP15.49■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF763Q0D2J5 394 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 MGAT2Q10469 447 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 MAP4K2Q12851 820 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 EBPQ15125 230 aaKnown RBP15.49■□□□□ 0.07
SSBP4-204ENST00000597724 PRICKLE4Q2TBC4 344 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 SH2D4BQ5SQS7 431 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 FAM180BQ6P0A1 224 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 IL20RBQ6UXL0 311 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 SLC29A4Q7RTT9 530 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 MDGA2Q7Z553 956 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.49■□□□□ 0.07
SSBP4-204ENST00000597724 OR2T11Q8NH01 316 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 ASB15Q8WXK1 588 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 PKNOX2Q96KN3 472 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 KCNK9Q9NPC2 374 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 HPF1Q9NWY4 346 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 C1orf109Q9NX04 203 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 UTS2RQ9UKP6 389 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
SSBP4-204ENST00000597724 POLR3HQ9Y535 204 aaPredicted RBP15.49■□□□□ 0.07
SSBP4-204ENST00000597724 ASH1LQ9NR48 2969 aaKnown RBP15.49■□□□□ 0.07
SSBP4-204ENST00000597724 ZWINTO95229 277 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 NADKO95544 446 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 LINC00032P0C843 101 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 NEFHP12036 1026 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 NT5EP21589 574 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 MST1P26927 711 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 SOX18P35713 384 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 SRSF11Q05519 484 aaKnown RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 C2orf80Q0P641 193 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 ELOAQ14241 798 aaKnown RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 CES4AQ5XG92 561 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 FAM71E1Q6IPT2 247 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 FAM111BQ6SJ93 734 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 OPN5Q6U736 354 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 LRRC25Q8N386 305 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF615Q8N8J6 731 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 OR7G1Q8NGA0 311 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 TWIST2Q8WVJ9 160 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 FRMD6Q96NE9 622 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 WWTR1Q9GZV5 400 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 STMN4Q9H169 189 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 LRTM1Q9HBL6 345 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 MYNNQ9NPC7 610 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 TIMMDC1Q9NPL8 285 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 MAT2BQ9NZL9 334 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 EHD3Q9NZN3 535 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 ZNF639Q9UID6 485 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 ZDHHC2Q9UIJ5 367 aa15.48■□□□□ 0.07
SSBP4-204ENST00000597724 WBP11Q9Y2W2 641 aaKnown RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 KLF13Q9Y2Y9 288 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-204ENST00000597724 ZGRF1Q86YA3 2104 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 HIVEP3Q5T1R4 2406 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 C2orf92A0A1B0GVN3 265 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 PIP5K1BO14986 540 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 LSM1O15116 133 aaKnown RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 DDCP20711 480 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 CEBPEQ15744 281 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 C6orf163Q5TEZ5 329 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 SULF2Q8IWU5 870 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 SAMD14Q8IZD0 417 aaPredicted RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 VWA5B2Q8N398 1253 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 SLC15A4Q8N697 577 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 FAM98AQ8NCA5 519 aaKnown RBP15.47■□□□□ 0.07
SSBP4-204ENST00000597724 PSD4Q8NDX1 1056 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 ADCY4Q8NFM4 1077 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 CDC26Q8NHZ8 85 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 PPP1R14CQ8TAE6 165 aa15.47■□□□□ 0.07
SSBP4-204ENST00000597724 PRR7Q8TB68 274 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms