RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 BRF2Q9HAW0 419 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 OXSMQ9NWU1 459 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 LYARQ9NX58 379 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 VTI1BQ9UEU0 232 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 KCNN3Q9UGI6 736 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 PHF11Q9UIL8 331 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 CLCA3PQ9Y6N3 262 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 CCDC168Q8NDH2 2452 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 GTF3C1Q12789 2109 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 POLQO75417 2590 aa16.24■□□□□ 0.19
SHKBP1-203ENST00000594298 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 PPP6CO00743 305 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 PLPP1O14494 284 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 IGHG3P01860 377 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 HOXD4P09016 255 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 HSD3B1P14060 373 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 CPN2P22792 545 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 HSD3B2P26439 372 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 NAGLUP54802 743 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 NUP107P57740 925 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 PLGLB1Q02325 96 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 ZNF844Q08AG5 666 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 PMPCAQ10713 525 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 BIKQ13323 160 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 GXYLT1Q4G148 440 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 SGO1Q5FBB7 561 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 LETMD1Q6P1Q0 360 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 CYP20A1Q6UW02 462 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 IL20RBQ6UXL0 311 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 GK5Q6ZS86 529 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 GPR180Q86V85 440 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 SLC22A16Q86VW1 577 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 NUDT13Q86X67 352 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 RNF175Q8N4F7 328 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 CDYL2Q8N8U2 506 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 PTPMT1Q8WUK0 201 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 CSF3RQ99062 836 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 TTTY12Q9BZ98 90 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 DDX31Q9H8H2 851 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 LIN28AQ9H9Z2 209 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 SLC24A3Q9HC58 644 aa16.23■□□□□ 0.19
SHKBP1-203ENST00000594298 A0A1B0GVC2 190 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 FAM166BA8MTA8 275 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 BCKDKO14874 412 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 ULK1O75385 1050 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 ESRRBO95718 433 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 IFNA16P05015 189 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 CD1EP15812 388 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 CNR1P21554 472 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 BUD31P41223 144 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 SOX3P41225 446 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 HK2P52789 917 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 STX4Q12846 297 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 HYAL4Q2M3T9 481 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 LIPMQ5VYY2 423 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 LRIG3Q6UXM1 1119 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 RTL4Q6ZR62 310 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 CLNKQ7Z7G1 428 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 CCDC71Q8IV32 467 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 GOLM1Q8NBJ4 401 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 OR14A16Q8NHC5 309 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 SGCZQ96LD1 299 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 MAPKAP1Q9BPZ7 522 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 FAM173AQ9BQD7 235 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 WDR41Q9HAD4 459 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 PNPLA3Q9NST1 481 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 ADAM29Q9UKF5 820 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 SLC12A4Q9UP95 1085 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 C2CD3Q4AC94 2353 aa16.22■□□□□ 0.19
SHKBP1-203ENST00000594298 A0A0G2JMM0 328 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 A0A1W2PPB8 328 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 A0A1W2PRS3 328 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 FIGNL2A6NMB9 653 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 KIR3DP1A8MWS1 328 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 NPIPA2E9PIF3 369 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 NPIPA3F8WFD2 350 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 WWP2O00308 870 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 MANBAO00462 879 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 TRIM13O60858 407 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 CRCPO75575 148 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 ETHE1O95571 254 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 PDYNP01213 254 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 ACVR2AP27037 513 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 BSGP35613 385 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 SERTAD2Q14140 314 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 FAM109AQ8N4B1 249 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 GBP7Q8N8V2 638 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 OR5M3Q8NGP4 307 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 ZNF559Q9BR84 538 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 TRMOQ9BU70 441 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 SORBS1Q9BX66 1292 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 ALOXE3Q9BYJ1 711 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 IL1RL2Q9HB29 575 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 MID1IP1Q9NPA3 183 aa16.21■□□□□ 0.19
SHKBP1-203ENST00000594298 ZNF225Q9UK10 706 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms