RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ACOT4Q8N9L9 421 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 VPS37AQ8NEZ2 397 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 STT3BQ8TCJ2 826 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
DDX39A-219ENST00000592927 MIEF2Q96C03 454 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 ABHD17AQ96GS6 310 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 EGLN2Q96KS0 407 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 THTPAQ9BU02 230 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 BHLHE41Q9C0J9 482 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-219ENST00000592927 SLC26A1Q9H2B4 701 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 REEP4Q9H6H4 257 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 WDR54Q9H977 334 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 FAM120CQ9NX05 1096 aaKnown RBP11.17□□□□□ -0.62
DDX39A-219ENST00000592927 LYARQ9NX58 379 aaKnown RBP11.17□□□□□ -0.62
DDX39A-219ENST00000592927 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
DDX39A-219ENST00000592927 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
DDX39A-219ENST00000592927 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 IGLV3-12A0A075B6K2 115 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 A0A0A6YYD5 115 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 VSTM2BA6NLU5 285 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 C9JVG2 144 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 DNAJB6O75190 326 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 ERN1O75460 977 aaKnown RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 LRATO95237 230 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 KCNH1O95259 989 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 BMP10O95393 424 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 ZGLP1P0C6A0 271 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 RNH1P13489 461 aaKnown RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 DRD2P14416 443 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 IL10P22301 178 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 F8A1P23610 371 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 XCR1P46094 333 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TRPC1P48995 793 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 DGKQP52824 942 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TAS2R50P59544 299 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 KLC1Q07866 573 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 SLAMF1Q13291 335 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PDE7AQ13946 482 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 RUNX2Q13950 521 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 NFYCQ13952 458 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 VWA2Q5GFL6 755 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PAGE3Q5JUK9 113 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 CPTPQ5TA50 214 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 C6orf163Q5TEZ5 329 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PGM2L1Q6PCE3 622 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 BNC2Q6ZN30 1099 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 ULK2Q8IYT8 1036 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 CDC26Q8NHZ8 85 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 GTF2H4Q92759 462 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TBC1D20Q96BZ9 403 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TM4SF18Q96CE8 201 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 LRRC58Q96CX6 371 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 COQ8BQ96D53 544 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PEX11GQ96HA9 241 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 ITCHQ96J02 903 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 OR52E6Q96RD3 313 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 GPATCH1Q9BRR8 931 aaKnown RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TGIF2Q9GZN2 237 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 LYRM4Q9HD34 91 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 C14orf105Q9NVL8 296 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 TCFL5Q9UL49 500 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 AP3M1Q9Y2T2 418 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 PTRH2Q9Y3E5 179 aaKnown RBP11.16□□□□□ -0.62
DDX39A-219ENST00000592927 SPACA6W5XKT8 324 aa11.16□□□□□ -0.62
DDX39A-219ENST00000592927 A0A096LPI6 279 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 PRSS51A0A1B0GVH4 220 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 AKAP10O43572 662 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 CNOT3O75175 753 aaKnown RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 CIB2O75838 187 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 KLF7O75840 302 aaPredicted RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 DDAH2O95865 285 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 GBAP04062 536 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 FHP07954 510 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 FURINP09958 794 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 FAM58BPP0C7Q3 252 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 DDCP20711 480 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 FOLR3P41439 243 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 LIM2P55344 173 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 RAB38P57729 211 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 RPS18P62269 152 aaKnown RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 ERV3-1Q14264 604 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 PGS1Q32NB8 556 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 MINDY4Q4G0A6 757 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 LRIF1Q5T3J3 769 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 MRM1Q6IN84 353 aaKnown RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 SHISA6Q6ZSJ9 500 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 NET1Q7Z628 596 aaPredicted RBP11.15□□□□□ -0.62
DDX39A-219ENST00000592927 DHDDSQ86SQ9 333 aa11.15□□□□□ -0.62
DDX39A-219ENST00000592927 ZC3H7AQ8IWR0 971 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms