RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ATP6AP2O75787 350 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 CLPSP04118 112 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 PIK3R1P27986 724 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 RPP38P78345 283 aaKnown RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 IFT88Q13099 833 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 TRAF3Q13114 568 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 SLC25A35Q3KQZ1 300 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 ZNF585AQ6P3V2 769 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 CDH24Q86UP0 819 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 GALNT12Q8IXK2 581 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 C17orf53Q8N3J3 647 aaPredicted RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 FAM13CQ8NE31 585 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 C17orf47Q8NEP4 570 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 MYRIPQ8NFW9 859 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 OR52B6Q8NGF0 335 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 OR5M9Q8NGP3 310 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 ZNF597Q96LX8 424 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 PAFAH2Q99487 392 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 EXO5Q9H790 373 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 CXorf21Q9HAI6 301 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 NPDC1Q9NQX5 325 aaPredicted RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 KCNN3Q9UGI6 736 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 CNOT11Q9UKZ1 510 aaKnown RBP12.22□□□□□ -0.45
APOC1-209ENST00000592885 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 C2orf92A0A1B0GVN3 265 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 LRRC3CA6NJW4 275 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 GLOD5A6NK44 160 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 CDH16O75309 829 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 OTCP00480 354 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 RPS17P08708 135 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 CELA3AP09093 270 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 GLI4P10075 376 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 ENDOUP21128 410 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 NR0B1P51843 470 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 NEK2P51955 445 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 NRG3P56975 720 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 FUT7Q11130 342 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 RIPPLY2Q5TAB7 128 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 PRAMEF20Q5VT98 475 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 HLA-DQA1Q5Y7H0 255 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 TTC19Q6DKK2 380 aaPredicted RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 CNPY4Q8N129 248 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 PLD6Q8N2A8 252 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 METTL4Q8N3J2 472 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 LIX1Q8N485 282 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 MMGT1Q8N4V1 131 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 OR7G1Q8NGA0 311 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 OR10G3Q8NGC4 313 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 OR4K14Q8NGD5 310 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 NEIL3Q8TAT5 605 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 PHF21BQ96EK2 531 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 FMO2Q99518 471 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 MRPL57Q9BQC6 102 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 DOHHQ9BU89 302 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 C1QTNF3Q9BXJ4 246 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 MRPL46Q9H2W6 279 aaKnown RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 ELOVL6Q9H5J4 265 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 BRF2Q9HAW0 419 aa12.21□□□□□ -0.45
APOC1-209ENST00000592885 SEMA4BQ9NPR2 832 aaPredicted RBP12.21□□□□□ -0.45
APOC1-209ENST00000592885 ARHGAP21Q5T5U3 1957 aa12.21□□□□□ -0.46
APOC1-209ENST00000592885 ADGRG4Q8IZF6 3080 aa12.21□□□□□ -0.46
APOC1-209ENST00000592885 DCHS2Q6V1P9 2916 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 NCKAP5O14513 1909 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 C1orf226A1L170 272 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 TRIM3O75382 744 aaPredicted RBP12.2□□□□□ -0.46
APOC1-209ENST00000592885 SNX4O95219 450 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 ACSL3O95573 720 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 CPMP14384 443 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 POU3F2P20265 443 aaPredicted RBP12.2□□□□□ -0.46
APOC1-209ENST00000592885 PEX19P40855 299 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 GLE1Q53GS7 698 aaKnown RBP12.2□□□□□ -0.46
APOC1-209ENST00000592885 TMEM198Q66K66 360 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 RTL6Q6ICC9 239 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 CCDC71Q8IV32 467 aaPredicted RBP12.2□□□□□ -0.46
APOC1-209ENST00000592885 ZNF615Q8N8J6 731 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 MNS1Q8NEH6 495 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 OR10Q1Q8NGQ4 319 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 UCK2Q9BZX2 261 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 OR10A5Q9H207 317 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 PROK2Q9HC23 129 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 ZBTB26Q9HCK0 441 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 ZNF358Q9NW07 568 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 TEX10Q9NXF1 929 aaPredicted RBP12.2□□□□□ -0.46
APOC1-209ENST00000592885 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 TRPS1Q9UHF7 1281 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 SNX6Q9UNH7 406 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 CFL2Q9Y281 166 aa12.2□□□□□ -0.46
APOC1-209ENST00000592885 INTS1Q8N201 2190 aaKnown RBP12.19□□□□□ -0.46
APOC1-209ENST00000592885 A0A087WUV0 522 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms