RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 EFCAB11Q9BUY7 163 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ALOXE3Q9BYJ1 711 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 REG4Q9BYZ8 158 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 OR51B5Q9H339 312 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 EHD1Q9H4M9 534 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CNOT10Q9H9A5 744 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 SEMA4BQ9NPR2 832 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 NUDT4Q9NZJ9 180 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 C6orf203Q9P0P8 240 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 WHRNQ9P202 907 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 TXNDC16Q9P2K2 825 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 MRPS33Q9Y291 106 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 YARS2Q9Y2Z4 477 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 CLCA3PQ9Y6N3 262 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 PRKDCP78527 4128 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 NBEAL2Q6ZNJ1 2754 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CR1P17927 2039 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ATP6AP2A0A1C7CYW4 349 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 A0A1W2PS29 197 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 OR14I1A6ND48 311 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 WASHC1A8K0Z3 465 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ACOT7O00154 380 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 CDK2AP1O14519 115 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 CTNSO60931 367 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ATP6AP2O75787 350 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 GLSO94925 669 aaPredicted RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 MTHFD2P13995 350 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 TNNI3P19429 210 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ENDOUP21128 410 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 CPN2P22792 545 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 PIGAP37287 484 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 AGFG1P52594 562 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 ATP5J2P56134 94 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 WNT3P56703 355 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 RNF4P78317 190 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 SORDQ00796 357 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ASPHQ12797 758 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 CALCOCO2Q13137 446 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 CLEC12BQ2HXU8 276 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 HYAL4Q2M3T9 481 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 WLSQ5T9L3 541 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 PRAMEF20Q5VT98 475 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 C18orf63Q68DL7 685 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 MED27Q6P2C8 311 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ADGRD1Q6QNK2 874 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ZDHHC24Q6UX98 284 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 RTL4Q6ZR62 310 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 C3orf62Q6ZUJ4 267 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 SEM1Q6ZVN7 128 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 RAPH1Q70E73 1250 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ISCA2Q86U28 154 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 MYLK4Q86YV6 388 aaPredicted RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 CENPLQ8N0S6 344 aaPredicted RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 TMEM132CQ8N3T6 1108 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 SPATA4Q8NEY3 305 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 TNIP2Q8NFZ5 429 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 HUS1BQ8NHY5 278 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 FBXO25Q8TCJ0 367 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 FBF1Q8TES7 1133 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 UBTD2Q8WUN7 234 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 KCTD4Q8WVF5 259 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 DAZLQ92904 295 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 UCN3Q969E3 161 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 PPWD1Q96BP3 646 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 NXNL1Q96CM4 212 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 MTERF1Q99551 399 aaKnown RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 ERP44Q9BS26 406 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 PITHD1Q9GZP4 211 aaPredicted RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 EPB41L4BQ9H329 900 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ZDHHC11Q9H8X9 412 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 LYRM4Q9HD34 91 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 TUBA8Q9NY65 449 aaPredicted RBP6.78□□□□□ -1.32
VAT1-209ENST00000592388 SPRR3Q9UBC9 169 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ATG4BQ9Y4P1 393 aa6.78□□□□□ -1.32
VAT1-209ENST00000592388 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 HMX2A2RU54 273 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 SH3D21A4FU49 640 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 FAM187AA6NFU0 413 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 LRRC3CA6NJW4 275 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 GLOD5A6NK44 160 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 K7EPI3 171 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 PLPP1O14494 284 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 EIF3HO15372 352 aaKnown RBP eCLIP6.77□□□□□ -1.33
VAT1-209ENST00000592388 EEF1E1O43324 174 aaKnown RBP6.77□□□□□ -1.33
VAT1-209ENST00000592388 TMPRSS11DO60235 418 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 KERAO60938 352 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 EEDO75530 441 aaKnown RBP6.77□□□□□ -1.33
VAT1-209ENST00000592388 SCELO95171 688 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 GBAP04062 536 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 PIK3CGP48736 1102 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 PLTPP55058 493 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 RPS13P62277 151 aaKnown RBP6.77□□□□□ -1.33
VAT1-209ENST00000592388 HERVK_113P63132 956 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 ERVK-8P63133 956 aa6.77□□□□□ -1.33
VAT1-209ENST00000592388 IGLV3-21P80748 117 aaPredicted RBP6.77□□□□□ -1.33
VAT1-209ENST00000592388 TNFRSF17Q02223 184 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms