RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 A0A096LPI6 279 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 OR2W5A6NFC9 320 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ZNF891A8MT65 544 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 PLOD3O60568 738 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 COQ9O75208 318 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ANP32DO95626 131 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 C6orf47O95873 294 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ICAM2P13598 275 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 OTX2P32243 289 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 RPS18P62269 152 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 PHC1P78364 1004 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 TLR1Q15399 786 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 PRICKLE4Q2TBC4 344 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ZNF628Q5EBL2 1059 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 FAAH2Q6GMR7 532 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 NDUFAF7Q7L592 441 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 TREML1Q86YW5 311 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 OR9A2Q8NGT5 310 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 GTF2H4Q92759 462 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ROPN1LQ96C74 230 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 CCNL2Q96S94 520 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 RYDENQ9NUL5 291 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 DDX18Q9NVP1 670 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 NDE1Q9NXR1 346 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 PPIEQ9UNP9 301 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 CFL2Q9Y281 166 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 FREM2Q5SZK8 3169 aa15.85■□□□□ 0.13
SCAMP4-211ENST00000588907 CCDC88CQ9P219 2028 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 IGHV1-45A0A0A0MS14 117 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 LOC100653049A0A140TA62 436 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 CCT8L1PA6NM43 557 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 EBAG9O00559 213 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 SOCS6O14544 535 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 MRASO14807 208 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 TLX3O43711 291 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PRAMEF2O60811 474 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 KRT34O76011 436 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 HPP00738 406 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 CALB2P22676 271 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 UQCRC2P22695 453 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PPIBP23284 216 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 MAGEA8P43361 318 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 EFNA3P52797 238 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 HBA1P69905 142 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 TXNL4AP83876 142 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PRSS53Q2L4Q9 553 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 ZNF750Q32MQ0 723 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 TRMT5Q32P41 509 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 LRIF1Q5T3J3 769 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 BROXQ5VW32 411 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 REP15Q6BDI9 236 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 FAM180BQ6P0A1 224 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PAPD4Q6PIY7 484 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 LANCL3Q6ZV70 420 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 ZNF551Q7Z340 670 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PPP1R32Q7Z5V6 425 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 MRGPREQ86SM8 312 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 ANKRD46Q86W74 232 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 OR2L13Q8N349 312 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 B3GNT7Q8NFL0 401 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 OR11G2Q8NGC1 345 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 OR56A1Q8NGH5 318 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 ADAMTS17Q8TE56 1095 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PTPMT1Q8WUK0 201 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 CTHRC1Q96CG8 243 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 ELP4Q96EB1 424 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 FER1L6-AS2Q96M78 137 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 SERHLQ9NQF3 203 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 MAT2BQ9NZL9 334 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 NTMQ9P121 344 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 IL17BQ9UHF5 180 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 CORO2BQ9UQ03 480 aa15.84■□□□□ 0.13
SCAMP4-211ENST00000588907 NSG1A0A0A6YYJ2 146 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 OR6C76A6NM76 312 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 KLK10O43240 276 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 HNRNPCL1O60812 293 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SOX30O94993 753 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 KRT16P08779 473 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 ESRRAP11474 423 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 COX6A1P12074 109 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 PGDP52209 483 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 RRADP55042 308 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 UCNP55089 124 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 DUSP2Q05923 314 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 FUT7Q11130 342 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 ART3Q13508 389 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 IL10RAQ13651 578 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SPDYE7PQ495Y7 208 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 PLAG1Q6DJT9 500 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SLC2A7Q6PXP3 512 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 KIRREL2Q6UWL6 708 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 TMEM107Q6UX40 140 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 HACD2Q6Y1H2 254 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 LRRC69Q6ZNQ3 347 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 VASH2Q86V25 355 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 CLECL1Q8IZS7 167 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 OR1N1Q8NGS0 311 aa15.83■□□□□ 0.12
SCAMP4-211ENST00000588907 SLC2A12Q8TD20 617 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms