RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 TNIP2Q8NFZ5 429 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 ATP6V1E2Q96A05 226 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 RMND5BQ96G75 393 aaPredicted RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 CDK15Q96Q40 435 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 CLEC4MQ9H2X3 399 aaPredicted RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 LIME1Q9H400 295 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 PROK2Q9HC23 129 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 PLEKHA6Q9Y2H5 1048 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 RNF11Q9Y3C5 154 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 PRRC2AP48634 2157 aaKnown RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 MED12Q93074 2177 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 OR6C76A6NM76 312 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 DVL2O14641 736 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 TP53I11O14683 189 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 SIX3O95343 332 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 CLPSP04118 112 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 MTHFD2P13995 350 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 CD99P14209 185 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 KRT15P19012 456 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 NT5EP21589 574 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 PTX3P26022 381 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 PIK3R1P27986 724 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 BSGP35613 385 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 BIKQ13323 160 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 RPS6KA2Q15349 733 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 HSPB2Q16082 182 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 NTRK2Q16620 822 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 FAM83EQ2M2I3 478 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 LIPJQ5W064 366 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 OR52E8Q6IFG1 317 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 KLC3Q6P597 504 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 GALNT12Q8IXK2 581 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 CENPLQ8N0S6 344 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 LRRC46Q96FV0 321 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 RILPQ96NA2 401 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 TRIB1Q96RU8 372 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 ZNF717Q9BY31 904 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 RAB17Q9H0T7 212 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 VPS11Q9H270 941 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 IPPKQ9H8X2 491 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 SNX15Q9NRS6 342 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 TEX10Q9NXF1 929 aaPredicted RBP12.58□□□□□ -0.4
HDAC5-208ENST00000588419 ASB4Q9Y574 426 aa12.58□□□□□ -0.4
HDAC5-208ENST00000588419 A0A096LPK6 155 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 CAPN14A8MX76 684 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 GNB5O14775 395 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 PGRMC2O15173 223 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 CTAG2O75638 210 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ACSL3O95573 720 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 C2P06681 752 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 CT62P0C5K7 136 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 TACR1P25103 407 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 TMED10P49755 219 aaKnown RBP12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ASCL1P50553 236 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ALDH18A1P54886 795 aaKnown RBP12.57□□□□□ -0.4
HDAC5-208ENST00000588419 NRG3P56975 720 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 NAB1Q13506 487 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 TRADDQ15628 312 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
HDAC5-208ENST00000588419 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 GOT1L1Q8NHS2 421 aaPredicted RBP12.57□□□□□ -0.4
HDAC5-208ENST00000588419 BRINP2Q9C0B6 783 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ZNF358Q9NW07 568 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 QPCTLQ9NXS2 382 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 NPFFR2Q9Y5X5 522 aa12.57□□□□□ -0.4
HDAC5-208ENST00000588419 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 H0YIV9 168 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
HDAC5-208ENST00000588419 IL2RAP01589 272 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 SLC35E2P0CK97 266 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 DNASE1P24855 282 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 TYK2P29597 1187 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 SERPINB8P50452 374 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CCNG1P51959 295 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CAV1Q03135 178 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CRYZQ08257 329 aaKnown RBP12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CBLBQ13191 982 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 FLYWCH1Q4VC44 716 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 EIPR1Q53HC9 387 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 WIPI1Q5MNZ9 446 aaPredicted RBP12.56□□□□□ -0.4
HDAC5-208ENST00000588419 TBCELQ5QJ74 424 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 MRM1Q6IN84 353 aaKnown RBP12.56□□□□□ -0.4
HDAC5-208ENST00000588419 ZDHHC24Q6UX98 284 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CYS1Q717R9 158 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
HDAC5-208ENST00000588419 PTGR2Q8N8N7 351 aaPredicted RBP12.56□□□□□ -0.4
HDAC5-208ENST00000588419 CHDHQ8NE62 594 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms