RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 COQ8BQ96D53 544 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 CXorf40BQ96DE9 158 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 DOHHQ9BU89 302 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 PLCXD1Q9NUJ7 323 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 ZNF282Q9UDV7 671 aaPredicted RBP13.87□□□□□ -0.19
CCDC43-203ENST00000588210 PAIP2BQ9ULR5 123 aaKnown RBP13.87□□□□□ -0.19
CCDC43-203ENST00000588210 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 RNF6Q9Y252 685 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 U3KQA8 63 aa13.87□□□□□ -0.19
CCDC43-203ENST00000588210 C17orf113A0A1B0GUU1 675 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 ETHE1O95571 254 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 IDSP22304 550 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TPP2P29144 1249 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 RRM2P31350 389 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 GGT2P36268 569 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 ILKQ13418 452 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 E2F2Q14209 437 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TBCEQ15813 527 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 C14orf28Q4W4Y0 310 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 PAGE2BQ5JRK9 111 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 C17orf82Q86X59 251 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 NAGSQ8N159 534 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 C11orf65Q8NCR3 313 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 OR2L2Q8NH16 312 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 UBE2FQ969M7 185 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 OR4K3Q96R72 315 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 OSGEPL1Q9H4B0 414 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TBC1D29Q9UFV1 150 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 OR5K4A6NMS3 321 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 RNASET2O00584 256 aaKnown RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 ADAMDEC1O15204 470 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 GP1BAP07359 652 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 ANXA4P09525 319 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 FTH1P19P0C7X4 201 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 PTX3P26022 381 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TIA1P31483 386 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 UGT2B10P36537 528 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 MAGEA8P43361 318 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 PNLIPRP1P54315 467 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TEKQ02763 1124 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 TSEN54Q7Z6J9 526 aaKnown RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 PLD3Q8IV08 490 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 P3H2Q8IVL5 708 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 CHTF18Q8WVB6 975 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 RPL3LQ92901 407 aaKnown RBP13.86□□□□□ -0.19
CCDC43-203ENST00000588210 NAT6Q93015 286 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 CCM2Q9BSQ5 444 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 RUBCNLQ9H714 662 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 LYVE1Q9Y5Y7 322 aa13.86□□□□□ -0.19
CCDC43-203ENST00000588210 ARHGEF17Q96PE2 2063 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-203ENST00000588210 A6NCN8 305 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 EFCAB9A8MZ26 197 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 GCM2O75603 506 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-203ENST00000588210 DKK1O94907 266 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 CATP04040 527 aaKnown RBP13.85□□□□□ -0.19
CCDC43-203ENST00000588210 MYF5P13349 255 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 F3P13726 295 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 SELENOWP63302 87 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 NAE1Q13564 534 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 ELOAQ14241 798 aaKnown RBP13.85□□□□□ -0.19
CCDC43-203ENST00000588210 SYTL3Q4VX76 610 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 AGAP7PQ5VUJ5 663 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 WASH2PQ6VEQ5 465 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 PLEKHG7Q6ZR37 379 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 OR56A3Q8NH54 315 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 ZHX1-C8orf76Q96EF9 292 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 COPS4Q9BT78 406 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 BHLHE41Q9C0J9 482 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-203ENST00000588210 DSN1Q9H410 356 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 WASH6PQ9NQA3 447 aa13.85□□□□□ -0.19
CCDC43-203ENST00000588210 KIR2DS5A0A0G2JLQ3 304 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 A0A0G2JNG1 304 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 KIR2DS3K7RE56 304 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 NUDT21O43809 227 aaKnown RBP13.84□□□□□ -0.19
CCDC43-203ENST00000588210 RFPL3O75679 317 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 GLB1P16278 677 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 IMPA1P29218 277 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 MAPK9P45984 424 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 TUBA1BP68363 451 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 KIR2DS5Q14953 304 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC43-203ENST00000588210 METRNLQ641Q3 311 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 ADNP2Q6IQ32 1131 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 GUSBP11Q6P575 273 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 TUBA1AQ71U36 451 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 SFTPA2Q8IWL1 248 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 ARL14Q8N4G2 192 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 DNAJC22Q8N4W6 341 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 OR7G3Q8NG95 312 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 OR4C15Q8NGM1 316 aa13.84□□□□□ -0.19
CCDC43-203ENST00000588210 GOT1L1Q8NHS2 421 aaPredicted RBP13.84□□□□□ -0.19
CCDC43-203ENST00000588210 MYDGFQ969H8 173 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms