RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CLEC18CQ8NCF0 446 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 PSD4Q8NDX1 1056 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 C16orf78Q8WTQ4 265 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 TSPAN10Q9H1Z9 355 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-207ENST00000587256 GIMAP4Q9NUV9 329 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 HEY2Q9UBP5 337 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 SEC14L3Q9UDX4 400 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 CES1P1Q9UKY3 287 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 ENTPD4Q9Y227 616 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 SVILO95425 2214 aa13.73□□□□□ -0.21
ATG4D-207ENST00000587256 PTPN13Q12923 2485 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 FLNBO75369 2602 aaKnown RBP13.72□□□□□ -0.21
ATG4D-207ENST00000587256 TMEM233B4DJY2 109 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 KLRC4-KLRK1H3BQV0 150 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 SLC28A1O00337 649 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 RGS14O43566 566 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 ATP1B1P05026 303 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 BPGMP07738 259 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 CT62P0C5K7 136 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 NEFHP12036 1026 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 DRD2P14416 443 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 MST1P26927 711 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 PTGER1P34995 402 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 SERPINB5P36952 375 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 GSTM5P46439 218 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 MEOX1P50221 254 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 KCNK10P57789 538 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 GPR85P60893 370 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 SRSF1Q07955 248 aaKnown RBP eCLIP13.72□□□□□ -0.21
ATG4D-207ENST00000587256 EBPQ15125 230 aaKnown RBP13.72□□□□□ -0.21
ATG4D-207ENST00000587256 MPEG1Q2M385 716 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-207ENST00000587256 FAM180BQ6P0A1 224 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 LRIG3Q6UXM1 1119 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 RTL4Q6ZR62 310 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 DDIASQ8IXT1 998 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 EXOSC8Q96B26 276 aaKnown RBP13.72□□□□□ -0.21
ATG4D-207ENST00000587256 PKNOX2Q96KN3 472 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 MIEF1Q9NQG6 463 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
ATG4D-207ENST00000587256 HECTD1Q9ULT8 2610 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 C2orf92A0A1B0GVN3 265 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 NPIPA5E9PKD4 350 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 TFECO14948 347 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 PEX1O43933 1283 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SEMA7AO75326 666 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SEC22BO75396 215 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 CLPSP04118 112 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 RFC3P40938 356 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SERPINB4P48594 390 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 RBPJQ06330 500 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 FUT7Q11130 342 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SULF2Q8IWU5 870 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SAMD14Q8IZD0 417 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 POGLUT1Q8NBL1 392 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 C11orf24Q96F05 449 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 CNRIP1Q96F85 164 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 LRTM1Q9HBL6 345 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 SSU72Q9NP77 194 aaKnown RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
ATG4D-207ENST00000587256 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 MAT2BQ9NZL9 334 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 NPIPA1Q9UND3 350 aa13.71□□□□□ -0.21
ATG4D-207ENST00000587256 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 G3V3Y1 287 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF354AO60765 605 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-207ENST00000587256 DDCP20711 480 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 ETV4P43268 484 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
ATG4D-207ENST00000587256 DUSP2Q05923 314 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 LTB4RQ15722 352 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 PRICKLE4Q2TBC4 344 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 NOXRED1Q6NXP6 359 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 FAM111BQ6SJ93 734 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 NUDCD3Q8IVD9 361 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 FAM13CQ8NE31 585 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 ADCY4Q8NFM4 1077 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 OR7G1Q8NGA0 311 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 SSC4DQ8WTU2 575 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 SPACA9Q96E40 222 aaPredicted RBP13.7□□□□□ -0.22
ATG4D-207ENST00000587256 PGM2Q96G03 612 aa13.7□□□□□ -0.22
ATG4D-207ENST00000587256 MAGED4Q96JG8 741 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms