RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 C15orf38-AP3S2A0A0A6YYH1 394 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 ANKRD33BA6NCL7 494 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 LRRC14BA6NHZ5 514 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 TRIM3O75382 744 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 SLC35E2P0CK97 266 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 SSTR4P31391 388 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 KIR2DL3P43628 341 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 ALDH18A1P54886 795 aaKnown RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 CAV1Q03135 178 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 DUSP8Q13202 625 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 RPS6KA2Q15349 733 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 FAM83EQ2M2I3 478 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 ACSF3Q4G176 576 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 OR52E8Q6IFG1 317 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 NUDT13Q86X67 352 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 NAXEQ8NCW5 288 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 DIO2Q92813 273 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 UCN3Q969E3 161 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 FOXC2Q99958 501 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 GPATCH1Q9BRR8 931 aaKnown RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 POLDIP3Q9BY77 421 aaKnown RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 CXXC4Q9H2H0 198 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 ZNF358Q9NW07 568 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 PYCARDQ9ULZ3 195 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 UTP11Q9Y3A2 253 aaKnown RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 AKAP6Q13023 2319 aa17.76■□□□□ 0.43
TRAF4-216ENST00000586813 PRRC2AP48634 2157 aaKnown RBP17.76■□□□□ 0.43
TRAF4-216ENST00000586813 C2orf92A0A1B0GVN3 265 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 A0A1W2PS29 197 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CAPN14A8MX76 684 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 C2P06681 752 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 BMP5P22003 454 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 UQCRC1P31930 480 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 PEX19P40855 299 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 FBXW4P57775 412 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CRYZQ08257 329 aaKnown RBP17.75■□□□□ 0.43
TRAF4-216ENST00000586813 GTF2H2Q13888 395 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 PCBP2Q15366 365 aaKnown RBP eCLIP17.75■□□□□ 0.434e-7■■■□□ 17.9
TRAF4-216ENST00000586813 TMEM198Q66K66 360 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 GTF2H2CQ6P1K8 395 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 ZDHHC24Q6UX98 284 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 TMEM64Q6YI46 380 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 GOLGA7Q7Z5G4 137 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 L3MBTL4Q8NA19 623 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 WDR20Q8TBZ3 569 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 TP53INP1Q96A56 240 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 SH3GL2Q99962 352 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CLEC4MQ9H2X3 399 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-216ENST00000586813 IPPKQ9H8X2 491 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CXorf21Q9HAI6 301 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 SNX15Q9NRS6 342 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CCM2LQ9NUG4 571 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-216ENST00000586813 PSD3Q9NYI0 1048 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 CRIM1Q9NZV1 1036 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 RNF11Q9Y3C5 154 aa17.75■□□□□ 0.43
TRAF4-216ENST00000586813 HMX2A2RU54 273 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 AHRRA9YTQ3 701 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 KDM4EB2RXH2 506 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-216ENST00000586813 FOXE1O00358 373 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-216ENST00000586813 SYT5O00445 386 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 DVL2O14641 736 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 TP53I11O14683 189 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 EPPINO95925 133 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 GBAP04062 536 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 PIK3CGP48736 1102 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 ASCL1P50553 236 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 NEK2P51955 445 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 WNT3P56703 355 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 ACAP2Q15057 778 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 TRADDQ15628 312 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 MROH9Q5TGP6 573 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 BICRALQ6AI39 1079 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 LACC1Q8IV20 430 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 GALNT12Q8IXK2 581 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 TNIP2Q8NFZ5 429 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 SPPL2AQ8TCT8 520 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 RILPQ96NA2 401 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 RASSF1Q9NS23 344 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 TEX10Q9NXF1 929 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-216ENST00000586813 ST6GALNAC2Q9UJ37 374 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 NPFFR2Q9Y5X5 522 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 DOCK7Q96N67 2140 aa17.74■□□□□ 0.43
TRAF4-216ENST00000586813 A0A096LPK6 155 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 FAM221AA4D161 298 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 PGRMC2O15173 223 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 SEMA3DO95025 777 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 SIX3O95343 332 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 PIK3R1P27986 724 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 CEACAM8P31997 349 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 TMED10P49755 219 aaKnown RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 GUCY2DQ02846 1103 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 FBXL19-AS1Q494R0 122 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 FLYWCH1Q4VC44 716 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 HLA-DQA1Q5Y7H0 255 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 KLC3Q6P597 504 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 RNASE6Q93091 150 aaKnown RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 LRRC46Q96FV0 321 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms