RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MDFIQ99750 246 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 ANGPTL4Q9BY76 406 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 CD274Q9NZQ7 290 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 EDARQ9UNE0 448 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 C15orf41Q9Y2V0 281 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 NINQ8N4C6 2090 aa10.86□□□□□ -0.67
BRCA1-225ENST00000586385 A0A0A6YYD5 115 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 IQANK1A0A1B0GTG1 560 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 EEF1E1-BLOC1S5C9J1V9 151 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CES2O00748 559 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 SIAH2O43255 324 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 EEF1E1O43324 174 aaKnown RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 LY6G6DO95868 133 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 IL18BPO95998 194 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CT62P0C5K7 136 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CTSSP25774 331 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 BSGP35613 385 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CASP3P42574 277 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 RPL21P46778 160 aaKnown RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 NAGLUP54802 743 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 RPS6KA2Q15349 733 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 HIST2H2ACQ16777 129 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 WIPI1Q5MNZ9 446 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 HIST2H2AA3Q6FI13 130 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 SLC29A4Q7RTT9 530 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ISCA2Q86U28 154 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 KIF18BQ86Y91 864 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ZCCHC7Q8N3Z6 543 aaKnown RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ZNF615Q8N8J6 731 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 UBTD2Q8WUN7 234 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 EXT2Q93063 718 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ADIPOR1Q96A54 375 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 HSPBAP1Q96EW2 488 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CMTM7Q96FZ5 175 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ART5Q96L15 291 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 TRIB1Q96RU8 372 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 ATOH8Q96SQ7 321 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 KRT12Q99456 494 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 G6PC3Q9BUM1 346 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CXorf21Q9HAI6 301 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 TEX10Q9NXF1 929 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-225ENST00000586385 CAMK2AQ9UQM7 478 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 SPACA6W5XKT8 324 aa10.85□□□□□ -0.67
BRCA1-225ENST00000586385 FREM3P0C091 2139 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 OR6C76A6NM76 312 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 UBXN8O00124 270 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PGRMC2O15173 223 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 AIFM1O95831 613 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 HEXAP06865 529 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 MTHFD2P13995 350 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PTPN6P29350 595 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 ADSLP30566 484 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 SSTR1P30872 391 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PTGDSP41222 190 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 ATP6V0D1P61421 351 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 NKX6-1P78426 367 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 FUT7Q11130 342 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 DDX39BQ13838 428 aaKnown RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PCBP2Q15366 365 aaKnown RBP eCLIP10.84□□□□□ -0.672e-7■■■□□ 17.1
BRCA1-225ENST00000586385 TBCELQ5QJ74 424 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 GRHL2Q6ISB3 625 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 CLEC9AQ6UXN8 241 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 SYDE1Q6ZW31 735 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PM20D2Q8IYS1 436 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PRR22Q8IZ63 422 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 SLC44A1Q8WWI5 657 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 RIT1Q92963 219 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 TP53INP1Q96A56 240 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 RGMAQ96B86 450 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 LRRC46Q96FV0 321 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 COX4I2Q96KJ9 171 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 MTERF1Q99551 399 aaKnown RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 TUBA1CQ9BQE3 449 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 CALHM2Q9HA72 323 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 NEUROD4Q9HD90 331 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-225ENST00000586385 MS4A12Q9NXJ0 267 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 GALNT8Q9NY28 637 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 PHF11Q9UIL8 331 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 DTX4Q9Y2E6 619 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 NPFFR2Q9Y5X5 522 aa10.84□□□□□ -0.67
BRCA1-225ENST00000586385 C2orf92A0A1B0GVN3 265 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 LRRC14BA6NHZ5 514 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 K7EPI3 171 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 DYRK3O43781 588 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 OR10H2O60403 315 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SNX4O95219 450 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 GOSR1O95249 250 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SLC35E2BP0CK96 405 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SLC35E2P0CK97 266 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 S1PR1P21453 382 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SERPINB1P30740 379 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms