RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 OR5L2Q8NGL0 311 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-215ENST00000584944 NCLNQ969V3 563 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 FCRL1Q96LA6 429 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 MESP1Q9BRJ9 268 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 ADNPQ9H2P0 1102 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 EPS8L2Q9H6S3 715 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 MMP25Q9NPA2 562 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 PTGFRNQ9P2B2 879 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 NUP210LQ5VU65 1888 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 A0A1W2PQ72 361 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 E9PBE3 544 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 TGFBR3LH3BV60 316 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CFLARO15519 480 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 ZFAND5O76080 213 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 ATP1B1P05026 303 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 NCF2P19878 526 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-215ENST00000584944 GALNSP34059 522 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CASRP41180 1078 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 IDH3AP50213 366 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 DIO3P55073 304 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 NME5P56597 212 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CLDN8P56748 225 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 IGLV3-21P80748 117 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-215ENST00000584944 GSTA3Q16772 222 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CRB2Q5IJ48 1285 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 ANKRD26P1Q6NSI1 321 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 RNF111Q6ZNA4 994 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 SZRD1Q7Z422 152 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CPLX4Q7Z7G2 160 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 MIER2Q8N344 545 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 SIRT6Q8N6T7 355 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 SLC2A12Q8TD20 617 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
TRAF4-215ENST00000584944 PTPMT1Q8WUK0 201 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-215ENST00000584944 UCN3Q969E3 161 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 SENP5Q96HI0 755 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-215ENST00000584944 FBXL20Q96IG2 436 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 IMMP1LQ96LU5 166 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 FAM107BQ9H098 131 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 CES1P1Q9UKY3 287 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 ERVK-19Q9WJR5 959 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 ZNF451Q9Y4E5 1061 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
TRAF4-215ENST00000584944 NBASA2RRP1 2371 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 DYTNA2CJ06 578 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 MASP2O00187 686 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 FCHO1O14526 889 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 BCAS2O75934 225 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 ITGAMP11215 1152 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 KIR3DL1P43629 444 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 EFNA3P52797 238 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 GNGT1P63211 74 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 SRSF11Q05519 484 aaKnown RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 HSPB3Q12988 150 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 DPY19L1Q2PZI1 675 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 LSM12Q3MHD2 195 aaKnown RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 SPDYE7PQ495Y7 208 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 ISLR2Q6UXK2 745 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 KRTCAP2Q8N6L1 136 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 ADCY4Q8NFM4 1077 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 OR1N1Q8NGS0 311 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 THAP3Q8WTV1 239 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 MARK4Q96L34 752 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 ZNF354BQ96LW1 612 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 OR52B2Q96RD2 323 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 GAL3ST4Q96RP7 486 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 WDR77Q9BQA1 342 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-215ENST00000584944 CCDC28BQ9BUN5 200 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 TAS2R7Q9NYW3 318 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 TUBD1Q9UJT1 453 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 CFL2Q9Y281 166 aa12.92□□□□□ -0.34
TRAF4-215ENST00000584944 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 PRAMEF2O60811 474 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 SLC22A3O75751 556 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 SLITRK5O94991 958 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 S100A3P33764 101 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 ARFIP2P53365 341 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■□□ 14.8
TRAF4-215ENST00000584944 MEP1AQ16819 746 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 SPRED3Q2MJR0 410 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 LACTB2Q53H82 288 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-215ENST00000584944 ANXA8L1Q5VT79 327 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 LINC00696Q6ZRV3 163 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 MAVSQ7Z434 540 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-215ENST00000584944 FDCSPQ8NFU4 85 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 OR7G1Q8NGA0 311 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 OR7A2PQ8NGA2 310 aa12.91□□□□□ -0.34
TRAF4-215ENST00000584944 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms