RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	USP28	Q96RU2	1077 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RUFY1	Q96T51	708 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCDC3	Q9BQI4	270 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PI4K2A	Q9BTU6	479 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OSBPL8	Q9BZF1	889 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRPV6	Q9H1D0	765 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ABCG8	Q9H221	673 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TNMD	Q9H2S6	317 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	EGLN3	Q9H6Z9	239 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ANO10	Q9NW15	660 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CYP39A1	Q9NYL5	469 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	UBQLN2	Q9UHD9	624 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ODF2L	Q9ULJ1	636 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	EXOC6B	Q9Y2D4	811 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DOCK1	Q14185	1865 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GBF1	Q92538	1859 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LOC285556	D6RIA3	1793 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZFYVE26	Q68DK2	2539 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ATAD5	Q96QE3	1844 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MEIOC	A2RUB1	952 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	C15orf61	A6NNL5	157 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SNURFL	B1AK76	121 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SYT7	O43581	403 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SAP30	O75446	220 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FGF19	O95750	216 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NGF	P01138	241 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MT-ND2	P03891	347 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	APRT	P07741	180 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF853	P0CG23	659 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCDC192	P0DO97	292 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CEACAM1	P13688	526 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ARF4	P18085	180 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PTMS	P20962	102 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GYG1	P46976	350 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCR4	P51679	360 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NDST2	P52849	883 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NME5	P56597	212 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CNTN1	Q12860	1018 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PPP1R8	Q12972	351 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DRP2	Q13474	957 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CDH18	Q13634	790 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CEACAM7	Q14002	265 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SHH	Q15465	462 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LCE1F	Q5T754	118 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PRAMEF8	Q5VWM4	474 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SNRNP48	Q6IEG0	339 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FAAP20	Q6NZ36	180 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CNST	Q6PJW8	725 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RABEPK	Q7Z6M1	372 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	C17orf64	Q86WR6	236 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HOGA1	Q86XE5	327 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LAX1	Q8IWV1	398 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	BATF2	Q8N1L9	274 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HDDC3	Q8N4P3	179 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KBTBD8	Q8NFY9	601 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OR13C5	Q8NGS8	318 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OLIG1	Q8TAK6	271 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GOLGA5	Q8TBA6	731 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ST7L	Q8TDW4	575 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RFT1	Q96AA3	541 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF559	Q9BR84	538 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM51	Q9BSJ1	452 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DDX47	Q9H0S4	455 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	WDR13	Q9H1Z4	485 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PNN	Q9H307	717 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ATP13A3	Q9H7F0	1226 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MED20	Q9H944	212 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	S100A14	Q9HCY8	104 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HOMER3	Q9NSC5	361 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ACOXL	Q9NUZ1	547 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DNAJC11	Q9NVH1	559 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCPG1	Q9ULG6	757 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MTF2	Q9Y483	593 aa	Predicted RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZHX2	Q9Y6X8	837 aa		3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNFX1	Q9P2E3	1918 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MAP1B	P46821	2468 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FLNB	O75369	2602 aa	Known RBP	3.16	□□□□□ -1.9
PPP4R1-229	ENST00000584754		A0A087WZ39	114 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TRBV4-1	A0A0J9YWV2	114 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCDC162P	A2VCL2	907 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TRAFD1	O14545	582 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ARPC1B	O15143	372 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MAGEB2	O15479	319 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ATP6V1G1	O75348	118 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CT45A8	P0DMV1	189 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CT45A9	P0DMV2	189 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GNB3	P16520	340 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CYP2B6	P20813	491 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C4BPB	P20851	252 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MARCKS	P29966	332 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SRD5A2	P31213	254 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GPR183	P32249	361 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RPL9	P32969	192 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MAGEB1	P43366	347 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NSF	P46459	744 aa	Known RBP	3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ASMT	P46597	345 aa		3.15	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC12A3	P55017	1021 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms