RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 VMP1Q96GC9 406 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 SORBS1Q9BX66 1292 aaKnown RBP14.52□□□□□ -0.09
SKA2-209ENST00000583976 UCK2Q9BZX2 261 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 MCCC2Q9HCC0 563 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 PLSCR2Q9NRY7 297 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 NKIRAS1Q9NYS0 192 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 RNF6Q9Y252 685 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 TSC22D4Q9Y3Q8 395 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 MMACHCQ9Y4U1 282 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 DNAJC13O75165 2243 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 ZNF469Q96JG9 3925 aaPredicted RBP14.51□□□□□ -0.09
SKA2-209ENST00000583976 TMEM200CA6NKL6 621 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 FOXE1O00358 373 aaPredicted RBP14.51□□□□□ -0.09
SKA2-209ENST00000583976 BIRC5O15392 142 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 NPHS1O60500 1241 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 OR2J2O76002 312 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 OR6B1O95007 311 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 KRT6AP02538 564 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 KRT6BP04259 564 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 KRT6CP48668 564 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 HTR6P50406 440 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 GPR143P51810 404 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 WDR4P57081 412 aaKnown RBP14.51□□□□□ -0.09
SKA2-209ENST00000583976 TFF3Q07654 80 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 TGM3Q08188 693 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 SLC13A2Q13183 592 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 RCN2Q14257 317 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 TMEM35AQ53FP2 167 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 ARL13AQ5H913 290 aaPredicted RBP14.51□□□□□ -0.09
SKA2-209ENST00000583976 EMC4Q5J8M3 183 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 CLEC6AQ6EIG7 209 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 ZNF321PQ8N8H1 164 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 PSD4Q8NDX1 1056 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 C16orf52Q8NHV5 167 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 AGR3Q8TD06 166 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 CENPKQ9BS16 269 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 DEFB127Q9H1M4 99 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 ACBD3Q9H3P7 528 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 COPS7BQ9H9Q2 264 aaPredicted RBP14.51□□□□□ -0.09
SKA2-209ENST00000583976 PRTFDC1Q9NRG1 225 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 COQ3Q9NZJ6 369 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 TNFRSF10DQ9UBN6 386 aa14.51□□□□□ -0.09
SKA2-209ENST00000583976 SPG11Q96JI7 2443 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 PHF3Q92576 2039 aaKnown RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 KLRC4-KLRK1H3BQV0 150 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 PLPP1O14494 284 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 B3GALT2O43825 422 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 ULK1O75385 1050 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 ENO1P06733 434 aaKnown RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 CHN1P15882 459 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 BGNP21810 368 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 ARRB2P32121 409 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 SOX3P41225 446 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 SSR2P43308 183 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 SSR4P51571 173 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 RAB38P57729 211 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 TERF2Q15554 542 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 AP5B1Q2VPB7 878 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 CES4AQ5XG92 561 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 OR4C11Q6IEV9 310 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 SRFBP1Q8NEF9 429 aaKnown RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 RGMAQ96B86 450 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 QRFPRQ96P65 431 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 KCNC2Q96PR1 638 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 SERPINI1Q99574 410 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 TRMOQ9BU70 441 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 ZNF395Q9H8N7 513 aaPredicted RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 EML4Q9HC35 981 aaKnown RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 PRDM7Q9NQW5 492 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 PPIEQ9UNP9 301 aaKnown RBP14.5□□□□□ -0.09
SKA2-209ENST00000583976 SLC12A4Q9UP95 1085 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 ERVK-11Q9UQG0 969 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 EML6Q6ZMW3 1958 aa14.5□□□□□ -0.09
SKA2-209ENST00000583976 A0A088AWK7 358 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 A8MVJ9 347 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 HMGB1P1B2RPK0 211 aaPredicted RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 WWP2O00308 870 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 CDK2AP1O14519 115 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 ITM2AO43736 263 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 ZNF354AO60765 605 aaPredicted RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 LYPLA1O75608 230 aaPredicted RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 GBAP04062 536 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 SERPINE1P05121 402 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 ZNF10P21506 573 aaPredicted RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 ATP5A1P25705 553 aaKnown RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 SLC18A1P54219 525 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 MTTPP55157 894 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 NUP107P57740 925 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 CUL3Q13618 768 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 ZNF793Q6ZN11 406 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 EID3Q8N140 333 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 OR2M7Q8NG81 312 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 OR5M9Q8NGP3 310 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 OR6Y1Q8NGX8 325 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 NRGNQ92686 78 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 RASL10BQ96S79 203 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 SERINC2Q96SA4 455 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 TBCDQ9BTW9 1192 aa14.49□□□□□ -0.09
SKA2-209ENST00000583976 MRPL1Q9BYD6 325 aaKnown RBP14.49□□□□□ -0.09
SKA2-209ENST00000583976 TP63Q9H3D4 680 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms