RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	MAGEA4	P43358	317 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	ASCL1	P50553	236 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	NEK2	P51955	445 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	PCDH1	Q08174	1060 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	GTF2H2	Q13888	395 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	RPS6KA2	Q15349	733 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	TOMM20	Q15388	145 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	HSPB2	Q16082	182 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	UAP1	Q16222	522 aa	Predicted RBP	13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	ACSF3	Q4G176	576 aa	Predicted RBP	13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	MROH9	Q5TGP6	573 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	LIPJ	Q5W064	366 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	HLA-DQA1	Q5Y7H0	255 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	MRM1	Q6IN84	353 aa	Known RBP	13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	GTF2H2C	Q6P1K8	395 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	CYS1	Q717R9	158 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	MAATS1	Q7Z4T9	603 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	GOLGA7	Q7Z5G4	137 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	NUDT13	Q86X67	352 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	SPATA4	Q8NEY3	305 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	FBXO25	Q8TCJ0	367 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	REPS1	Q96D71	796 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	RMND5B	Q96G75	393 aa	Predicted RBP	13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	CDK15	Q96Q40	435 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	ACKR4	Q9NPB9	350 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	QPCTL	Q9NXS2	382 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	ST6GALNAC2	Q9UJ37	374 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	CAMK2A	Q9UQM7	478 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	PLEKHA6	Q9Y2H5	1048 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	SLC6A5	Q9Y345	797 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	RNF11	Q9Y3C5	154 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732		A0A087X1B8	175 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR6C76	A6NM76	312 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	DVL2	O14641	736 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	TP53I11	O14683	189 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	PGRMC2	O15173	223 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	TRIM3	O75382	744 aa	Predicted RBP	13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	SIX3	O95343	332 aa	Predicted RBP	13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	ACSL3	O95573	720 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	C2	P06681	752 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	CT62	P0C5K7	136 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	MASP1	P48740	699 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	CRYZ	Q08257	329 aa	Known RBP	13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	TRADD	Q15628	312 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	FAM83E	Q2M2I3	478 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR52E8	Q6IFG1	317 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	ZNF441	Q8N8Z8	693 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	RILP	Q96NA2	401 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	SH3GL2	Q99962	352 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	TMUB1	Q9BVT8	246 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	IPPK	Q9H8X2	491 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	SNX15	Q9NRS6	342 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	RASSF1	Q9NS23	344 aa		13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	TEX10	Q9NXF1	929 aa	Predicted RBP	13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	UTP11	Q9Y3A2	253 aa	Known RBP	13.88	□□□□□ -0.19
SREBF1-222	ENST00000583732	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732		H0YIV9	168 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	SLC35E2	P0CK97	266 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	NT5E	P21589	574 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TACR1	P25103	407 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	PIK3R1	P27986	724 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	AGFG1	P52594	562 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	ALDH18A1	P54886	795 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	PPP2R2A	P63151	447 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	NAB1	Q13506	487 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	NNAT	Q16517	81 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	FLYWCH1	Q4VC44	716 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TBCEL	Q5QJ74	424 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	C6orf163	Q5TEZ5	329 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	FBXW10	Q5XX13	1052 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	ZDHHC24	Q6UX98	284 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TGIF2LY	Q8IUE0	185 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	GALNT12	Q8IXK2	581 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	CHDH	Q8NE62	594 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	RHEBL1	Q8TAI7	183 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	WDR20	Q8TBZ3	569 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	SPPL2A	Q8TCT8	520 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	NINJ1	Q92982	152 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	RNASE6	Q93091	150 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	GNRHR2	Q96P88	292 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TRIB1	Q96RU8	372 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TIMP4	Q99727	224 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	FOXC2	Q99958	501 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR10A5	Q9H207	317 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	DDX31	Q9H8H2	851 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	CXorf21	Q9HAI6	301 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	TSC22D4	Q9Y3Q8	395 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732	NPFFR2	Q9Y5X5	522 aa		13.87	□□□□□ -0.19
SREBF1-222	ENST00000583732		A0A096LPK6	155 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732		A6NNC1	897 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CAPN14	A8MX76	684 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	SYT5	O00445	386 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	GNB5	O14775	395 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	EPPIN	O95925	133 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	DNASE1	P24855	282 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CDK9	P50750	372 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	ARFIP1	P53367	373 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CAV1	Q03135	178 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CUL3	Q13618	768 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms