RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PUS3Q9BZE2 481 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 XPO4Q9C0E2 1151 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 DCTPP1Q9H773 170 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 IL1RL2Q9HB29 575 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 HPS4Q9NQG7 708 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 SPATA2Q9UM82 520 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 ENTPD4Q9Y227 616 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 RPH3AQ9Y2J0 694 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 SPAG9O60271 1321 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 NPC1L1Q9UHC9 1359 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 BCLAF3A2AJT9 711 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 NME2P1O60361 137 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 MT-ND1P03886 318 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 HIST1H2AGP0C0S8 130 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 FOSL2P15408 326 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 GNSP15586 552 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 GATA1P15976 413 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 CALML3P27482 149 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 CCL11P51671 97 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC12A3P55017 1021 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 GSTO1P78417 241 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 BTG3Q14201 252 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 CLPPQ16740 277 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 FAM182AQ5T1J6 154 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 WDR25Q64LD2 544 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 WDR88Q6ZMY6 472 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 RDH11Q8TC12 318 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 KIAA1524Q8TCG1 905 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 HIST1H2ACQ93077 130 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 DEFB118Q96PH6 123 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 COQ7Q99807 217 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 RBM24Q9BX46 236 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 ELL3Q9HB65 397 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 IKZF3Q9UKT9 509 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 DNPEPQ9ULA0 475 aa4.45□□□□□ -1.7
SMARCE1-219ENST00000583294 TMEM89A2RUT3 159 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 SRRM5B3KS81 715 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 PROS1P07225 676 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 CCDC159P0C7I6 412 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 IL4RP24394 825 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 CYLC2Q14093 348 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 PDK1Q15118 436 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 CCL14Q16627 93 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 OR6B2Q6IFH4 312 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 ARMCX5Q6P1M9 558 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 TMUB2Q71RG4 321 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC22A16Q86VW1 577 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC13A3Q8WWT9 602 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 P3H4Q92791 437 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 CAPNS2Q96L46 248 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 RNF41Q9H4P4 317 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 Q9HAA7 133 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 SEC14L4Q9UDX3 406 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 KCNN3Q9UGI6 736 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 AFF2P51816 1311 aa4.44□□□□□ -1.7
SMARCE1-219ENST00000583294 IGKV3D-20A0A0C4DH25 116 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ARHGAP42A6NI28 874 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 RNF212BA8MTL3 300 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 IGHG3P01860 377 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ALPPP05187 535 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 FCGR3AP08637 254 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 CCDC192P0DO97 292 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ALPPL2P10696 532 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 SFNP31947 248 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 NDST1P52848 882 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 SSTP61278 116 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 PCK2Q16822 640 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 HKDC1Q2TB90 917 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 TCTEX1D4Q5JR98 221 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 RFWD3Q6PCD5 774 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 MIER3Q7Z3K6 550 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 GPR142Q7Z601 462 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 TAF8Q7Z7C8 310 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ADGRD2Q7Z7M1 963 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 LUZP1Q86V48 1076 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ANKRD9Q96BM1 317 aaPredicted RBP4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ACCSQ96QU6 501 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 ZNF446Q9NWS9 450 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 KLHDC2Q9Y2U9 406 aa4.43□□□□□ -1.7
SMARCE1-219ENST00000583294 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 RENP00797 406 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 OAS1P00973 400 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 PGK2P07205 417 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 APRTP07741 180 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 HSD17B1P14061 328 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 FOLR2P14207 255 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 PPP2R1BP30154 601 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 HSPA1LP34931 641 aa4.42□□□□□ -1.7
SMARCE1-219ENST00000583294 NPY2RP49146 381 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms