RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NME2P1O60361 137 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 OR6B1O95007 311 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 CBX6O95503 412 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 HSPA4LO95757 839 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 FGF4P08620 206 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 CT62P0C5K7 136 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 LINC00032P0C843 101 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 NME2P22392 152 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 PTGER1P34995 402 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 SOX3P41225 446 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 GSTM5P46439 218 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC37A1P57057 533 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 C2orf80Q0P641 193 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 CHI3L2Q15782 390 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF227Q86WZ6 799 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 GPALPP1Q8IXQ4 340 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 LRRC25Q8N386 305 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 ANKRD42Q8N9B4 389 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 DNAJB8Q8NHS0 232 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM76AQ8TAV0 307 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC22A8Q8TCC7 542 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 NR4A3Q92570 626 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 EXOSC8Q96B26 276 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 C11orf24Q96F05 449 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 CNRIP1Q96F85 164 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 PAIP2Q9BPZ3 127 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 TUBB1Q9H4B7 451 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 LRTM1Q9HBL6 345 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 TIMMDC1Q9NPL8 285 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 MIEF1Q9NQG6 463 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 GIMAP4Q9NUV9 329 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 C1orf109Q9NX04 203 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 ENTPD4Q9Y227 616 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 KLF13Q9Y2Y9 288 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 CCL27Q9Y4X3 112 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 DNAJC15Q9Y5T4 150 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 TENM4Q6N022 2769 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 PRRC2CQ9Y520 2896 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
SMARCE1-218ENST00000582955 RP1L1Q8IWN7 2480 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 RELNP78509 3460 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 PIP5K1BO14986 540 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 BIRC5O15392 142 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 ATP1B1P05026 303 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 SERPINE1P05121 402 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 EDN3P14138 238 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 PRPH2P23942 346 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 ARRB2P32121 409 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 RPL38P63173 70 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 DUSP2Q05923 314 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 CASP8Q14790 479 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 EBPQ15125 230 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 LTB4RQ15722 352 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 MPEG1Q2M385 716 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 GALNTL6Q49A17 601 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 HLA-DQA1Q5Y7H0 255 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM111BQ6SJ93 734 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 OPN5Q6U736 354 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 RNF165Q6ZSG1 346 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 Q6ZSR9 355 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 MDGA2Q7Z553 956 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 SAMD14Q8IZD0 417 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 VWA5B2Q8N398 1253 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 ST6GALNAC3Q8NDV1 305 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 ADCY4Q8NFM4 1077 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 OR2T11Q8NH01 316 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 METTL2AQ96IZ6 378 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 SLX1AQ9BQ83 275 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 WWTR1Q9GZV5 400 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 OR10A5Q9H207 317 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 MYNNQ9NPC7 610 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 BCAP29Q9UHQ4 241 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 ZDHHC2Q9UIJ5 367 aa11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 UBR5O95071 2799 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-218ENST00000582955 C2orf92A0A1B0GVN3 265 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 ITM2AO43736 263 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF354AO60765 605 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 SKAP2O75563 359 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 LYPLA1O75608 230 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 CLPSP04118 112 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 DDCP20711 480 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 MEOX1P50221 254 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 GPR85P60893 370 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 FUT7Q11130 342 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 MPP2Q14168 576 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 KIAA0040Q15053 153 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 PRICKLE4Q2TBC4 344 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 UGT3A2Q3SY77 523 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 PIGGQ5H8A4 983 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 FHL5Q5TD97 284 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF324BQ6AW86 544 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM71E1Q6IPT2 247 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms