RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KCTD8Q6ZWB6 473 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 TSEN54Q7Z6J9 526 aaKnown RBP21.37■■□□□ 1.01
CCDC47-204ENST00000582252 C11orf74Q86VG3 221 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 IQCHQ86VS3 1027 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 OOSP2Q86WS3 158 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 AVL9Q8NBF6 648 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 OR10G2Q8NGC3 310 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 OR4C15Q8NGM1 316 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 BBS10Q8TAM1 723 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 SLC37A2Q8TED4 501 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 CNRIP1Q96F85 164 aaPredicted RBP21.37■■□□□ 1.01
CCDC47-204ENST00000582252 MAPKAP1Q9BPZ7 522 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 MS4A12Q9NXJ0 267 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 ENOPH1Q9UHY7 261 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 CACNA1EQ15878 2313 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 A0A0J9YVX5 310 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 ZSCAN9O15535 394 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-204ENST00000582252 B3GALT2O43825 422 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 MFN2O95140 757 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 SMIM10L1P0DMW3 83 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 OR12D1P0DN82 309 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 IL7RP16871 459 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 YAP1P46937 504 aaKnown RBP21.36■■□□□ 1.01
CCDC47-204ENST00000582252 CRISP3P54108 245 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 NUP107P57740 925 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 RAPSNQ13702 412 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 MICAQ29983 383 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 RPS26P11Q5JNZ5 115 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-204ENST00000582252 ARMC6Q6NXE6 501 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 TSPYL5Q86VY4 417 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-204ENST00000582252 CCDC116Q8IYX3 515 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 TMEM105Q8N8V8 129 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 ZFAND2BQ8WV99 257 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 SMIM10Q96HG1 83 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 GABARAPL3Q9BY60 117 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 TCEAL2Q9H3H9 227 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-204ENST00000582252 SYNPO2LQ9H987 977 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 POLR1BQ9H9Y6 1135 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF556Q9HAH1 456 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 HRASLS2Q9NWW9 162 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 PILRAQ9UKJ1 303 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 POFUT2Q9Y2G5 429 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 PI4KAP42356 2102 aa21.36■■□□□ 1.01
CCDC47-204ENST00000582252 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF701M0R085 212 aaPredicted RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 GADD45GO95257 159 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CD247P20963 164 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CPN2P22792 545 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CD38P28907 300 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CLK3P49761 638 aaKnown RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 NPRL3Q12980 569 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SIM2Q14190 667 aaPredicted RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 WDR45BQ5MNZ6 344 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 PRAMEF8Q5VWM4 474 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 PRAMEF7Q5VXH5 474 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 TMEFF1Q8IYR6 380 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 DTWD2Q8NBA8 298 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SUN3Q8TAQ9 357 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 BAHD1Q8TBE0 780 aaPredicted RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 MIPOL1Q8TD10 442 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 XAGE5Q8WWM1 108 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 MAGED4Q96JG8 741 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF354BQ96LW1 612 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 FCRL4Q96PJ5 515 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 PITX2Q99697 317 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 PSD2Q9BQI7 771 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SEC14L3Q9UDX4 400 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 NDRG4Q9ULP0 352 aaKnown RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SNX5Q9Y5X3 404 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SPACA6W5XKT8 324 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ARRDC5A6NEK1 342 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CPNE6O95741 557 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CYP4B1P13584 511 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ETS2P15036 469 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 JUNBP17275 347 aaPredicted RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 POLR2IP36954 125 aaKnown RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 HMGA2P52926 109 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CXCR4P61073 352 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CSTF1Q05048 431 aaKnown RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CDK5R2Q13319 367 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 CTU2Q2VPK5 515 aaKnown RBP21.35■■□□□ 1.01
CCDC47-204ENST00000582252 RNF44Q7L0R7 432 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF605Q86T29 641 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 LGI4Q8N135 537 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 ZDHHC1Q8WTX9 485 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 PATE1Q8WXA2 126 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 DNASE2BQ8WZ79 361 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 TMIGD2Q96BF3 282 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 SERHL2Q9H4I8 314 aa21.35■■□□□ 1.01
CCDC47-204ENST00000582252 TNRC6BQ9UPQ9 1833 aaKnown RBP21.34■■□□□ 1.01
CCDC47-204ENST00000582252 SLC1A7O00341 560 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 CTSVO60911 334 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 ANGPTL1O95841 491 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 FEN1P39748 380 aaKnown RBP21.34■■□□□ 1.01
CCDC47-204ENST00000582252 PRKAG1P54619 331 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 HHEXQ03014 270 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 DUSP7Q16829 419 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 EXOC3L2Q2M3D2 409 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF542PQ5EBM4 170 aa21.34■■□□□ 1.01
CCDC47-204ENST00000582252 MAML2Q8IZL2 1156 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms