RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PTGFRNQ9P2B2 879 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 ZNF639Q9UID6 485 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 BTNL2Q9UIR0 455 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 MAN2B2Q9Y2E5 1009 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 CAPN7Q9Y6W3 813 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 DMXL2Q8TDJ6 3036 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 ACACAQ13085 2346 aa9.71□□□□□ -0.85
CCDC47-203ENST00000580986 A0A1W2PP18 115 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 WASHC1A8K0Z3 465 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 BBIP1A8MTZ0 92 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 K7ENP7 123 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PEX12O00623 359 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CDK2AP1O14519 115 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 FCHO1O14526 889 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 OR10H2O60403 315 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 BCAS2O75934 225 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 NPPAP01160 153 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 IGKV3-11P04433 115 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 ZCCHC18P0CG32 403 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PRDX6P30041 224 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 GPR143P51810 404 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 RRADP55042 308 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SOX8P57073 446 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 FUT7Q11130 342 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CDC20Q12834 499 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 KLF10Q13118 480 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PCOLCEQ15113 449 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SFT2D3Q587I9 215 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF628Q5EBL2 1059 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 C6orf163Q5TEZ5 329 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 INO80CQ6PI98 192 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PAPD4Q6PIY7 484 aaKnown RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PAOXQ6QHF9 649 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 LANCL3Q6ZV70 420 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 MTDHQ86UE4 582 aaKnown RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 VASH2Q86V25 355 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 ARMC10Q8N2F6 343 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 VWA5B2Q8N398 1253 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 TMEM102Q8N9M5 508 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 NFAM1Q8NET5 270 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 B3GNT7Q8NFL0 401 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 OR7G1Q8NGA0 311 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 OR9I1Q8NGQ6 314 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 M1APQ8TC57 530 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 PTPMT1Q8WUK0 201 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 RIT1Q92963 219 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 UCN3Q969E3 161 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 MOAP1Q96BY2 351 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SPDL1Q96EA4 605 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 FER1L6-AS2Q96M78 137 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SLC25A23Q9BV35 468 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CCDC106Q9BWC9 280 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 GLIPR2Q9H4G4 154 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 RMND5AQ9H871 391 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SLAMF7Q9NQ25 335 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 P4HTMQ9NXG6 502 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 MAT2BQ9NZL9 334 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CCDC167Q9P0B6 97 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 POLHQ9Y253 713 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 MRPS18BQ9Y676 258 aaKnown RBP9.71□□□□□ -0.86
CCDC47-203ENST00000580986 GMEB1Q9Y692 573 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CLCA3PQ9Y6N3 262 aa9.71□□□□□ -0.86
CCDC47-203ENST00000580986 CROCCQ5TZA2 2017 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 ZFHX4Q86UP3 3567 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 NSG1A0A0A6YYJ2 146 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 A0A1W2PRB8 838 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR2W5A6NFC9 320 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CCDC154A6NI56 674 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OR6C76A6NM76 312 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 CAPN14A8MX76 684 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 C17orf105B2RV13 164 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 EFSO43281 561 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SOX30O94993 753 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 PSMG1O95456 288 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 DDAH2O95865 285 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 IFNA16P05015 189 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SNRPB2P08579 225 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 WT1P19544 449 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 OTX2P32243 289 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 FEN1P39748 380 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 MAGEA8P43361 318 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 TRPC1P48995 793 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 NCBP2P52298 156 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 MANFP55145 182 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 TMPRSS3P57727 454 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 FOXL2P58012 376 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 SLC26A5P58743 744 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 PSPHP78330 225 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 PHC1P78364 1004 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 TXNL4AP83876 142 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 DUSP2Q05923 314 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 MGAT2Q10469 447 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 AIMP2Q13155 320 aaKnown RBP9.7□□□□□ -0.86
CCDC47-203ENST00000580986 MAPKAPK3Q16644 382 aa9.7□□□□□ -0.86
CCDC47-203ENST00000580986 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms