RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.51□□□□□ -0.09
SS18-216ENST00000580751 TAS2R7Q9NYW3 318 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 BAIAP2L1Q9UHR4 511 aa14.51□□□□□ -0.09
SS18-216ENST00000580751 LEF1Q9UJU2 399 aaPredicted RBP14.51□□□□□ -0.09
SS18-216ENST00000580751 PCSK5Q92824 1860 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ZFYVE26Q68DK2 2539 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 IGHV3-20A0A0C4DH32 117 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 LOC100653049A0A140TA62 436 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 SAGE2PA6NJ88 616 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 SCAMP2O15127 329 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 PGRMC2O15173 223 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 KRT34O76011 436 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 PGRP06401 933 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 KRT16P08779 473 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ICAM2P13598 275 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 S100A3P33764 101 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 KIR3DL1P43629 444 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 STT3AP46977 705 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ZFP36L2P47974 494 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 C2orf80Q0P641 193 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 TBR1Q16650 682 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 MMEL1Q495T6 779 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 DNAL1Q4LDG9 190 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ANXA8L1Q5VT79 327 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 CPZQ66K79 652 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 PLAG1Q6DJT9 500 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 RIPOR1Q6ZS17 1223 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 OR4N5Q8IXE1 308 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ST13P4Q8IZP2 240 aaPredicted RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 DPP10Q8N608 796 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 OR9I1Q8NGQ6 314 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 DAZLQ92904 295 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 RBM18Q96H35 190 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 TEX37Q96LM6 180 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 IMMP1LQ96LU5 166 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 DGAT2Q96PD7 388 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 BHLHE41Q9C0J9 482 aaPredicted RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 LRMDAQ9H2I8 198 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 RMND5AQ9H871 391 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 PNO1Q9NRX1 252 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 GIMAP4Q9NUV9 329 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 GID8Q9NWU2 228 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 FAM120CQ9NX05 1096 aaKnown RBP14.5□□□□□ -0.09
SS18-216ENST00000580751 UTS2RQ9UKP6 389 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 CES1P1Q9UKY3 287 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 CLCA3PQ9Y6N3 262 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 ZNF780BQ9Y6R6 833 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 PIEZO2Q9H5I5 2752 aa14.5□□□□□ -0.09
SS18-216ENST00000580751 NR5A2O00482 541 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 DYRK3O43781 588 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 OR10H2O60403 315 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 ERAL1O75616 437 aaKnown RBP14.49□□□□□ -0.09
SS18-216ENST00000580751 SERPINA7P05543 415 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 SLC35E2P0CK97 266 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 CSNK2A2P19784 350 aaPredicted RBP14.49□□□□□ -0.09
SS18-216ENST00000580751 IL12AP29459 219 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 XKP51811 444 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 CHAF1BQ13112 559 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 CPTPQ5TA50 214 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 IRAK1BP1Q5VVH5 260 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 KBTBD2Q8IY47 623 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 MMP21Q8N119 569 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 OR14A16Q8NHC5 309 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 EXTL1Q92935 676 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 UCN3Q969E3 161 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 EGLN2Q96KS0 407 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 BTBD10Q9BSF8 475 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 MMADHCQ9H3L0 296 aaPredicted RBP14.49□□□□□ -0.09
SS18-216ENST00000580751 C5AR2Q9P296 337 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 ENTPD4Q9Y227 616 aa14.49□□□□□ -0.09
SS18-216ENST00000580751 ERICH4A6NGS2 130 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 WASHC1A8K0Z3 465 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 B2RBV5 119 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 C17orf105B2RV13 164 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 CPMP14384 443 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 TNNI3P19429 210 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 ITGA3P26006 1051 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 GALNSP34059 522 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 NME5P56597 212 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 SOX8P57073 446 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 SLC26A5P58743 744 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 ART3Q13508 389 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 TLR1Q15399 786 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 BTBD16Q32M84 506 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 FAM174BQ3ZCQ3 159 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 SPATS1Q496A3 300 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 C16orf89Q6UX73 402 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 GK5Q6ZS86 529 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 TICAM1Q8IUC6 712 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 ARHGAP24Q8N264 748 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 GALNT16Q8N428 558 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 KRTCAP2Q8N6L1 136 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 CLHC1Q8NHS4 586 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 M1APQ8TC57 530 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 EXOSC8Q96B26 276 aaKnown RBP14.48□□□□□ -0.09
SS18-216ENST00000580751 PPCDCQ96CD2 204 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 SLC7A6OSQ96CW6 309 aaPredicted RBP14.48□□□□□ -0.09
SS18-216ENST00000580751 HOPXQ9BPY8 73 aaPredicted RBP14.48□□□□□ -0.09
SS18-216ENST00000580751 ARHGAP9Q9BRR9 750 aa14.48□□□□□ -0.09
SS18-216ENST00000580751 SLC35C2Q9NQQ7 365 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms