RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 C2CD4BA6NLJ0 364 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TCP11X1B4DZS4 312 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 HSBP1L1C9JCN9 74 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 E9PMD0 336 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SGK494L7N484 410 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ARPC1BO15143 372 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ARPC3O15145 178 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 YKT6O15498 198 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 RNASEH1O60930 286 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 DNAJB6O75190 326 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SCGNO76038 276 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PAPSS2O95340 614 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ANP32DO95626 131 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ALPIP09923 528 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ZCCHC18P0CG32 403 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PNMTP11086 282 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CEACAM1P13688 526 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 GOT1P17174 413 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PRKACBP22694 351 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 KCNJ4P48050 445 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CLCN4P51793 760 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 VAMP7P51809 220 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 THOP1P52888 689 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 MAZP56270 477 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ABATP80404 500 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TGM3Q08188 693 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 BST1Q10588 318 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PNRC1Q12796 327 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TRDNQ13061 729 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 MAB21L1Q13394 359 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 DAZAP2Q15038 168 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 RBBP5Q15291 538 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 HKDC1Q2TB90 917 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 Q4G0T1 1027 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ZC2HC1CQ53FD0 456 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 XKR3Q5GH77 459 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 METTL11BQ5VVY1 283 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 OR4A47Q6IF82 309 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ZSCAN25Q6NSZ9 544 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SLC39A4Q6P5W5 647 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CTR9Q6PD62 1173 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PACS1Q6VY07 963 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF704Q6ZNC4 412 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 MON1BQ7L1V2 547 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CENPQQ7L2Z9 268 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 LHFPL4Q7Z7J7 247 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SERINC5Q86VE9 423 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CHSY1Q86X52 802 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ECHDC2Q86YB7 292 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TDHQ8IZJ6 230 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CEP112Q8N8E3 955 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SMYD1Q8NB12 490 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 NPEPL1Q8NDH3 523 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 LILRB4Q8NHJ6 448 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 HMGCLL1Q8TB92 370 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 FAM81AQ8TBF8 368 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 RAET1EQ8TD07 263 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 WFIKKN2Q8TEU8 576 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TSEN15Q8WW01 171 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SPRYD4Q8WW59 207 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SEPT8Q92599 483 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 OSTF1Q92882 214 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 WBP2Q969T9 261 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 MCHR2Q969V1 340 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM45BQ96B21 275 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 HAVCR1Q96D42 359 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 HPDLQ96IR7 371 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 C12orf66Q96MD2 445 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 FAM20AQ96MK3 541 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 NPY6RQ99463 290 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 OMDQ99983 421 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 UBAC1Q9BSL1 405 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 FUNDC2Q9BWH2 189 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 RBM24Q9BX46 236 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 GSDMCQ9BYG8 508 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 SLC7A5P2Q9GIP4 190 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ZMYND12Q9H0C1 365 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 FAM124BQ9H5Z6 455 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 AAMDCQ9H7C9 122 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TDRD3Q9H7E2 651 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CALHM2Q9HA72 323 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PDGFCQ9NRA1 345 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CHRAC1Q9NRG0 131 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PHPT1Q9NRX4 125 aaPredicted RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 P2RX2Q9UBL9 471 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 PEF1Q9UBV8 284 aaKnown RBP2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CDH9Q9ULB4 789 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 B9D1Q9UPM9 204 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 NCKAP1Q9Y2A7 1128 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ATG4BQ9Y4P1 393 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 GMEB1Q9Y692 573 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 COL6A3P12111 3177 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 GCC2Q8IWJ2 1684 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 COL14A1Q05707 1796 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LMTK2Q8IWU2 1503 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 DUOX2Q9NRD8 1548 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LOC105371242A0A075B767 164 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms