RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KRT6AP02538 564 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 GBAP04062 536 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 KRT6BP04259 564 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 IGKV3-11P04433 115 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FHP07954 510 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 LINC00032P0C843 101 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 RNH1P13489 461 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HOXB9P17482 250 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MAOAP21397 527 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 S1PR1P21453 382 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MMP11P24347 488 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HMOX2P30519 316 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SSR2P43308 183 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 XCR1P46094 333 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 KRT6CP48668 564 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MRPL19P49406 292 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PPM1FP49593 454 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 RPL14P50914 215 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PLA2G16P53816 162 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SOX8P57073 446 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 C21orf58P58505 322 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 STXBP1P61764 594 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MC1RQ01726 317 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MGAT2Q10469 447 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ASPHQ12797 758 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CDC20Q12834 499 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 IFT88Q13099 833 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 KLF10Q13118 480 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 STX3Q13277 289 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HIST2H2ACQ16777 129 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NDUFA9Q16795 377 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 LINC00303Q3SY05 128 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TUBB8Q3ZCM7 444 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC9B1Q4ZJI4 515 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SGO1Q5FBB7 561 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 C6orf136Q5SQH8 315 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ARHGAP40Q5TG30 622 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 VWA5B1Q5TIE3 1220 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HHATQ5VTY9 493 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM71E1Q6IPT2 247 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NIPAL1Q6NVV3 410 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NOXRED1Q6NXP6 359 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TRIM40Q6P9F5 258 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 EPGNQ6UW88 154 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SHISA6Q6ZSJ9 500 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ABHD13Q7L211 337 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKRD37Q7Z713 158 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MRGPREQ86SM8 312 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NUDT13Q86X67 352 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MYLK4Q86YV6 388 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 WDR75Q8IWA0 830 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 LRRC34Q8IZ02 419 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CCDC63Q8NA47 563 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM47BQ8NA70 645 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 APCDD1LQ8NCL9 501 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 OR11G2Q8NGC1 345 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SUN3Q8TAQ9 357 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 DNAJB14Q8TBM8 379 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 AGR3Q8TD06 166 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PPP4R1Q8TF05 950 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 STARD8Q92502 1023 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 KISS1RQ969F8 398 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 RGMAQ96B86 450 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TBC1D20Q96BZ9 403 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NTNG2Q96CW9 530 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 REPS1Q96D71 796 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 C19orf60Q96EN9 201 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MMABQ96EY8 250 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PEX11GQ96HA9 241 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TEX37Q96LM6 180 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MAGEB18Q96M61 343 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 OR52B2Q96RD2 323 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CCNL2Q96S94 520 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 CCT7Q99832 543 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 EBF4Q9BQW3 602 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SPATA25Q9BR10 227 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR87Q9BY21 358 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TRIM55Q9BYV6 548 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 IQCGQ9H095 443 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ELOVL6Q9H5J4 265 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 GPN2Q9H9Y4 310 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKHQ9HCJ1 492 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC52A3Q9NQ40 469 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TXLNGQ9NUQ3 528 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 INTS9Q9NV88 658 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 C14orf105Q9NVL8 296 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 THAP1Q9NVV9 213 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TAS2R7Q9NYW3 318 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 IFT80Q9P2H3 777 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 TRPC4Q9UBN4 977 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 VPS29Q9UBQ0 182 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF282Q9UDV7 671 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MCM8Q9UJA3 840 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 NXT1Q9UKK6 140 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms