RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GDF1P27539 372 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SERPINB3P29508 390 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 CASQ1P31415 396 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 UQCRC1P31930 480 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 STX2P32856 288 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 BUD31P41223 144 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 IST1P53990 364 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DUSP8Q13202 625 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 NNATQ16517 81 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SGO1Q5FBB7 561 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 LIPJQ5W064 366 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 CES4AQ5XG92 561 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 FAM180BQ6P0A1 224 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 FAM111BQ6SJ93 734 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 ARSKQ6UWY0 536 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PLXDC2Q6UX71 529 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SYT10Q6XYQ8 523 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SPNS3Q6ZMD2 512 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 CLYBLQ8N0X4 340 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 MMP21Q8N119 569 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 LRRC25Q8N386 305 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 FBXW8Q8N3Y1 598 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 ZCCHC7Q8N3Z6 543 aaKnown RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 LIX1Q8N485 282 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PTGR2Q8N8N7 351 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 RELL2Q8NC24 303 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 SIMC1Q8NDZ2 872 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 OR52B6Q8NGF0 335 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 WDR20Q8TBZ3 569 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DIO2Q92813 273 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 ATP6V1E2Q96A05 226 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PHF21BQ96EK2 531 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 GNRHR2Q96P88 292 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 GPATCH1Q9BRR8 931 aaKnown RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 CENPKQ9BS16 269 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DOHHQ9BU89 302 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DDX31Q9H8H2 851 aaKnown RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 CCM2LQ9NUG4 571 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 MS4A12Q9NXJ0 267 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DNAJB12Q9NXW2 375 aaKnown RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 KCNN3Q9UGI6 736 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 ADGRE2Q9UHX3 823 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 BOKQ9UMX3 212 aaPredicted RBP8.2□□□□□ -1.1
GGA3-207ENST00000578896 DTX4Q9Y2E6 619 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 A0A087X1B8 175 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 A0A1B0GTL3 188 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 SYCE1LA8MT33 242 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 H0YIV9 168 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 PPP6CO00743 305 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 GNB5O14775 395 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 WDR1O75083 606 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 TRIM3O75382 744 aaPredicted RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 NME6O75414 186 aaPredicted RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 KLHL2O95198 593 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ALDOAP04075 364 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 KLK1P06870 262 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 SLC35E2P0CK97 266 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 NT5EP21589 574 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 BMP5P22003 454 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 TYK2P29597 1187 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 SERPINB1P30740 379 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 XKP51811 444 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ALDH18A1P54886 795 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 DUSP2Q05923 314 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ILF2Q12905 390 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 ACAP2Q15057 778 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
GGA3-207ENST00000578896 TOMM20Q15388 145 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 NTRK2Q16620 822 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 FAM83EQ2M2I3 478 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 EIPR1Q53HC9 387 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 TECRLQ5HYJ1 363 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 RIPPLY2Q5TAB7 128 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 FNDC7Q5VTL7 733 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 TMEM198Q66K66 360 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 SLC15A4Q8N697 577 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ZNF441Q8N8Z8 693 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 RHEBL1Q8TAI7 183 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 NEIL3Q8TAT5 605 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ART5Q96L15 291 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 RILPQ96NA2 401 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 LRRC1Q9BTT6 524 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 MRPL1Q9BYD6 325 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 EPB41L4BQ9H329 900 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 WDR41Q9HAD4 459 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 CXorf21Q9HAI6 301 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 ZBTB26Q9HCK0 441 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 FARSBQ9NSD9 589 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 LYARQ9NX58 379 aaKnown RBP8.19□□□□□ -1.1
GGA3-207ENST00000578896 NINJ2Q9NZG7 142 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 EHD3Q9NZN3 535 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
GGA3-207ENST00000578896 CNIH4Q9P003 139 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms