RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 F5P12259 2224 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3DA0A087WVF3 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3IA0A087WXS9 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3EA0A087X179 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3KA0A087X1G2 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3FA6NER0 549 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3LB9A6J9 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 H3BN98 237 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 EML2O95834 649 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ADH1BP00325 375 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3HP0C7X1 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 PKLRP30613 574 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 SERPINB10P48595 397 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 SNRPNP63162 240 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 DMPKQ09013 629 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 SFSWAPQ12872 951 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 LASP1Q14847 261 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MED22Q15528 200 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3GQ6DHY5 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3CQ6IPX1 549 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 TBC1D3Q8IZP1 549 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 FCGR1BQ92637 280 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MS4A6EQ96DS6 147 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 C16orf58Q96GQ5 468 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MAPKAP1Q9BPZ7 522 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MTIF3Q9H2K0 278 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CA5BQ9Y2D0 317 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 WBP11Q9Y2W2 641 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ENTPD6O75354 484 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 H1F0P07305 194 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CERS1P27544 350 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MAGEA10P43363 369 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 LBX1P52954 281 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 SLC9A5Q14940 896 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 SLC46A3Q7Z3Q1 461 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 OR2L8Q8NGY9 312 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 MCFD2Q8NI22 146 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CNRIP1Q96F85 164 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ZNF607Q96SK3 696 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CHCHD6Q9BRQ6 235 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CENPOQ9BU64 300 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 C1QTNF2Q9BXJ5 285 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 UCK2Q9BZX2 261 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 WDR12Q9GZL7 423 aaKnown RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 ACSS1Q9NUB1 689 aaPredicted RBP16.59■□□□□ 0.25
ERBB2-205ENST00000578199 B3GNT3Q9Y2A9 372 aa16.59■□□□□ 0.25
ERBB2-205ENST00000578199 CEP290O15078 2479 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 RNGTTO60942 597 aaKnown RBP16.58■□□□□ 0.25
ERBB2-205ENST00000578199 CBFA2T3O75081 653 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 CLDN2P57739 230 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 TARDBPQ13148 414 aaKnown RBP eCLIP16.58■□□□□ 0.25
ERBB2-205ENST00000578199 ENPP2Q13822 863 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 TMEM107Q6UX40 140 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 RD3Q7Z3Z2 195 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 PSD2Q9BQI7 771 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 FGF22Q9HCT0 170 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 POLE4Q9NR33 117 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 FBXO8Q9NRD0 319 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 DNAJC27Q9NZQ0 273 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 P2RX2Q9UBL9 471 aa16.58■□□□□ 0.25
ERBB2-205ENST00000578199 VCANP13611 3396 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 ZW10O43264 779 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 EPPINO95925 133 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 HMGN2P05204 90 aaKnown RBP16.58■□□□□ 0.24
ERBB2-205ENST00000578199 SERPINB1P30740 379 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 KIR2DL1P43626 348 aaPredicted RBP16.58■□□□□ 0.24
ERBB2-205ENST00000578199 RPS3AP61247 264 aaKnown RBP16.58■□□□□ 0.24
ERBB2-205ENST00000578199 DNASE1L3Q13609 305 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 LRRC32Q14392 662 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 AGERQ15109 404 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 TRIM16LQ309B1 348 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 TOR1AIP1Q5JTV8 583 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 SYCE2Q6PIF2 218 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 IQCF1Q8N6M8 205 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 NATD1Q8N6N6 113 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 OR2L3Q8NG85 312 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 OR4E2Q8NGC2 313 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 SUN3Q8TAQ9 357 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 CD93Q9NPY3 652 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 ADAM29Q9UKF5 820 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 A4GNTQ9UNA3 340 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 SLC17A4Q9Y2C5 497 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 ASB4Q9Y574 426 aa16.58■□□□□ 0.24
ERBB2-205ENST00000578199 DSPPQ9NZW4 1301 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 POM121BA6NF01 834 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 TLR4O00206 839 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 PDE9AO76083 593 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 CHRM4P08173 479 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 OSMP13725 252 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 TNNI3P19429 210 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 HIST1H1TP22492 207 aaPredicted RBP16.57■□□□□ 0.24
ERBB2-205ENST00000578199 GRK3P35626 688 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 RGS6P49758 472 aa16.57■□□□□ 0.24
ERBB2-205ENST00000578199 FUT5Q11128 374 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms