RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 FRMD1Q8N878 549 aa12.96□□□□□ -0.34
NDEL1-204ENST00000578172 CHTF18Q8WVB6 975 aa12.96□□□□□ -0.34
NDEL1-204ENST00000578172 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.34
NDEL1-204ENST00000578172 MMP27Q9H306 513 aa12.96□□□□□ -0.34
NDEL1-204ENST00000578172 DOCK9Q9BZ29 2069 aa12.96□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TIE1P35590 1138 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 EIF2DP41214 584 aaKnown RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 RACK1P63244 317 aaKnown RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ZSWIM7Q19AV6 140 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 FAM46DQ8NEK8 389 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ZNF607Q96SK3 696 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 DPH7Q9BTV6 452 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 CSNK1G3Q9Y6M4 447 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 CLTBP09497 229 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 PSKH1P11801 424 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 PPM1AP35813 382 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TGFBR2P37173 567 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 NNATQ16517 81 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 FAM92BQ6ZTR7 304 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 KRT74Q7RTS7 529 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SLC46A3Q7Z3Q1 461 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 OR8H1Q8NGG4 311 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ZFPM2Q8WW38 1151 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 MCCC1Q96RQ3 725 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 H0YIV9 168 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 DSCR3O14972 297 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ATF4P18848 351 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 NTSP30990 170 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SDC2P34741 201 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 RGS8P57771 180 aaPredicted RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SLC7A9P82251 487 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SELENBP1Q13228 472 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 LTB4RQ15722 352 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ABI3BPQ7Z7G0 1075 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 SLC30A8Q8IWU4 369 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 ECHDC3Q96DC8 303 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 LRRC3BQ96PB8 259 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 KLHL31Q9H511 634 aa12.95□□□□□ -0.34
NDEL1-204ENST00000578172 NUFIP1Q9UHK0 495 aaKnown RBP12.95□□□□□ -0.34
NDEL1-204ENST00000578172 TMPRSS11DO60235 418 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 KCNK2O95069 426 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PRNPP04156 253 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 CYP17A1P05093 508 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 CCNYL3P0C7X3 344 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 NR2F6P10588 404 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 MAGEA2P43356 314 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 MTAPQ13126 283 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 SGCGQ13326 291 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZNF630Q2M218 657 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 TIMM50Q3ZCQ8 353 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZNF542PQ5EBM4 170 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 NDUFAF5Q5TEU4 345 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PAMR1Q6UXH9 720 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 TMC8Q8IU68 726 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 HDDC3Q8N4P3 179 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 SLC7A13Q8TCU3 470 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 EPYCQ99645 322 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PTGFRNQ9P2B2 879 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PCDHGA2Q9Y5H1 932 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PEX16Q9Y5Y5 336 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZC3H12DA2A288 527 aaKnown RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 MID1O15344 667 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 LCMT2O60294 686 aaKnown RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PRLHRP49683 370 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZDHHC20Q5W0Z9 365 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 PLEKHM3Q6ZWE6 761 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 LAPTM4BQ86VI4 370 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 SMPDL3AQ92484 453 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 TREX2Q9BQ50 279 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-204ENST00000578172 SMURF1Q9HCE7 757 aa12.94□□□□□ -0.34
NDEL1-204ENST00000578172 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms