RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 SPACA9Q96E40 222 aaPredicted RBP8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 ZNF597Q96LX8 424 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 TRIB1Q96RU8 372 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 AMBRA1Q9C0C7 1298 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 PARVBQ9HBI1 364 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 PROK2Q9HC23 129 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 EIF2B3Q9NR50 452 aaKnown RBP8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 BFARQ9NZS9 450 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 C6orf203Q9P0P8 240 aaPredicted RBP8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 COPS7AQ9UBW8 275 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 FETUBQ9UGM5 382 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 PDE10AQ9Y233 779 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 COMMD10Q9Y6G5 202 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 CHCHD2Q9Y6H1 151 aaPredicted RBP8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 FREM3P0C091 2139 aa8.42□□□□□ -1.06
TOM1L1-223ENST00000576932 ROS1P08922 2347 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■□□□□ 10.1
TOM1L1-223ENST00000576932 A0A088AWK7 358 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 NRDCO43847 1150 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CTNSO60931 367 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 IFNA16P05015 189 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PAMP19021 973 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 ZNF10P21506 573 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 GDF1P27539 372 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 STXBP1P61764 594 aaKnown RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 REEP5Q00765 189 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CTBP1Q13363 440 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 RUNX2Q13950 521 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 RCN2Q14257 317 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 EFTUD2Q15029 972 aaKnown RBP eCLIP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 KRTAP24-1Q3LI83 254 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PRAMEF20Q5VT98 475 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PIWIL4Q7Z3Z4 852 aaKnown RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 ADGRE4PQ86SQ3 457 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CCDC170Q8IYT3 715 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CELF2-AS1Q8N7Q2 184 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 LRRC57Q8N9N7 239 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 ANKRD53Q8N9V6 530 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 C9orf106Q8NAJ2 232 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 BVESQ8NE79 360 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 OR56A3Q8NH54 315 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 SLC2A12Q8TD20 617 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CD200R1Q8TD46 325 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 UCN3Q969E3 161 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 MFSD3Q96ES6 412 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PIK3IP1Q96FE7 263 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 SNF8Q96H20 258 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 WDYHV1Q96HA8 205 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 MARK4Q96L34 752 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 DOHHQ9BU89 302 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 FRMD8P1Q9BZ68 369 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 UBQLN3Q9H347 655 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CDC42EP3Q9UKI2 254 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 PACSIN3Q9UKS6 424 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 CAMK2AQ9UQM7 478 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 NINQ8N4C6 2090 aa8.41□□□□□ -1.06
TOM1L1-223ENST00000576932 TCRBV7S2A1N4TA0A589 114 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 BTNL10A8MVZ5 291 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 C4orf51C9J302 202 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CYR61O00622 381 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 SNX4O95219 450 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 ACTL6AO96019 429 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 HIST1H2AGP0C0S8 130 aaPredicted RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CPN1P15169 458 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 HIST1H2ADP20671 130 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CHMP24386 653 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 GSTM2P28161 218 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 SERPINB3P29508 390 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 RPL22P35268 128 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 HNF4AP41235 474 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 RPL21P46778 160 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CDK9P50750 372 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 HNRNPFP52597 415 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 ATP5J2P56134 94 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 AP1S2P56377 157 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 SESN2P58004 480 aaPredicted RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 BTN3A2P78410 334 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CRADDP78560 199 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 EGR3Q06889 387 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 ASPHQ12797 758 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 FOXF2Q12947 444 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CSHL1Q14406 222 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 OASLQ15646 514 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CAND1Q86VP6 1230 aaKnown RBP8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 PALM2Q8IXS6 379 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CPNE9Q8IYJ1 553 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 TMEM52Q8NDY8 209 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 TTLQ8NG68 377 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 ZNF721Q8TF20 911 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CAVIN3Q969G5 261 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 FAR2Q96K12 515 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 HIST1H2AHQ96KK5 128 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
TOM1L1-223ENST00000576932 WFIKKN1Q96NZ8 548 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms