RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 JAZF1Q86VZ6 243 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 DNAJC22Q8N4W6 341 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF676Q8N7Q3 588 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 RNF121Q9H920 327 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 RLIMQ9NVW2 624 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 CALML5Q9NZT1 146 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC25A12O75746 678 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 IFNA7P01567 189 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 LYSMD2Q8IV50 215 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 VRK3Q8IV63 474 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 COQ8AQ8NI60 647 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 CARS2Q9HA77 564 aaKnown RBP17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 FAM47E-STBD1D6RA91 191 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 MEN1O00255 615 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 KCNK5O95279 499 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 SRCP12931 536 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 RACK1P63244 317 aaKnown RBP17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 TAF13Q15543 124 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 LRRC37A5PQ49AS3 106 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 AGAP7PQ5VUJ5 663 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 NOXA1Q86UR1 476 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 COQ8BQ96D53 544 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 CNDP2Q96KP4 475 aaKnown RBP17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF354BQ96LW1 612 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 DPEP2Q9H4A9 486 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 SRRDQ9UH36 339 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 FAAHO00519 579 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 ANKRD28O15084 1053 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 OSMP13725 252 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 PTPN2P17706 415 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 ACADLP28330 430 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 TRAM2Q15035 370 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 OXA1LQ15070 435 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 LRRC26Q2I0M4 334 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 PLBD1Q6P4A8 553 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 GAL3ST4Q96RP7 486 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 SRMSQ9H3Y6 488 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 NUDT15Q9NV35 164 aa17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 MARF1Q9Y4F3 1742 aaKnown RBP17.04■□□□□ 0.32
ATPAF1-214ENST00000576409 TAPBPO15533 448 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 CLEC2LP0C7M8 214 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 FAUP35544 74 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 GBX2P52951 348 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 YBX1P67809 324 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SP140Q13342 867 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 NKG7Q16617 165 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 COX20Q5RI15 118 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 HDDC3Q8N4P3 179 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF514Q96K75 400 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 CLEC2DQ9UHP7 191 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 CA12O43570 354 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 NCR1O76036 304 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF30P17039 623 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 CHMP24386 653 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 APEX1P27695 318 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SNTB2Q13425 540 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 IL20RBQ6UXL0 311 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 LRRTM4Q86VH4 590 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 GJD3Q8N144 294 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 NEURL2Q9BR09 285 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 GRIP1Q9Y3R0 1128 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 MCIDASD6RGH6 385 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 BLOC1S5-TXNDC5H3BN57 136 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 LYRM1O43325 122 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 FMO6PO60774 539 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 AOAHP28039 575 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 VEZF1Q14119 521 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 GRASPQ7Z6J2 395 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC30A8Q8IWU4 369 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 TEX26Q8N6G2 289 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC6A16Q9GZN6 736 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 GASTP01350 101 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 EMP3P54852 163 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 CXCR4P61073 352 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 STXBP1P61764 594 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 XKR4Q5GH76 650 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 ANKRD54Q6NXT1 300 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 MRPL10Q7Z7H8 261 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 VWA5B2Q8N398 1253 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 LINC01465Q8N7H1 131 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 OR8S1Q8NH09 359 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 ECHDC3Q96DC8 303 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 ZSWIM3Q96MP5 696 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 MCCC1Q96RQ3 725 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 MBOAT4Q96T53 435 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 PRR14Q9BWN1 585 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 WDR26Q9H7D7 661 aa17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
ATPAF1-214ENST00000576409 SMLR1H3BR10 107 aa17.02■□□□□ 0.32
ATPAF1-214ENST00000576409 M0R233 179 aa17.02■□□□□ 0.32
ATPAF1-214ENST00000576409 NARSO43776 548 aaKnown RBP17.02■□□□□ 0.32
ATPAF1-214ENST00000576409 AOC2O75106 756 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms