RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 COPG1Q9Y678 874 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 NAV2Q8IVL1 2488 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 MED12Q93074 2177 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 AKAP9Q99996 3911 aa8.02□□□□□ -1.12
SMG6-216ENST00000575176 C1orf226A1L170 272 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 CCDC151A5D8V7 595 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 WWP2O00308 870 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ITM2AO43736 263 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 LYPLA1O75608 230 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 GLSO94925 669 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 LDLRP01130 860 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 SP1P08047 785 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 FGF4P08620 206 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 UROSP10746 265 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 SDC1P18827 310 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 GPX3P22352 226 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 HMOX2P30519 316 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ARL1P40616 181 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 SERPINB4P48594 390 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 TAS2R50P59544 299 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 NAA20P61599 178 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 KCNC4Q03721 635 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 FOXO1Q12778 655 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 STX4Q12846 297 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 PDE7AQ13946 482 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 KRT71Q3SY84 523 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 SPIN4Q56A73 249 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ARL13AQ5H913 290 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 CCNYL2Q5T2Q4 361 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 TTC19Q6DKK2 380 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 HSDL2Q6YN16 418 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ZFP62Q8NB50 900 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 ZNF675Q8TD23 568 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 C16orf78Q8WTQ4 265 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ZNF764Q96H86 408 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 EGLN2Q96KS0 407 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 DGAT2Q96PD7 388 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 UTP23Q9BRU9 249 aaKnown RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 CENPKQ9BS16 269 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 DEFB126Q9BYW3 111 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ANKRA2Q9H9E1 313 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 MYNNQ9NPC7 610 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 KLHL1Q9NR64 748 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 SENP1Q9P0U3 644 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 LRFN1Q9P244 771 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 TEKT2Q9UIF3 430 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 ACTL7BQ9Y614 415 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 CHCHD2Q9Y6H1 151 aaPredicted RBP8.02□□□□□ -1.13
SMG6-216ENST00000575176 CLCA3PQ9Y6N3 262 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 SPACA6W5XKT8 324 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 PDZD2O15018 2839 aa8.02□□□□□ -1.13
SMG6-216ENST00000575176 NUP214P35658 2090 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 ABCA12Q86UK0 2595 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 LRRC3CA6NJW4 275 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 H3BQF6 201 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 AZIN1O14977 448 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 PIP5K1BO14986 540 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 CTIFO43310 598 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 NME6O75414 186 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 ZFAND5O76080 213 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 IFNA16P05015 189 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 STSP08842 583 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 FBXO45P0C2W1 286 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 CCL3P10147 92 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 DEKP35659 375 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 FRKP42685 505 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 CYB561P49447 251 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 EMDP50402 254 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 KCNK10P57789 538 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 MRPS35P82673 323 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 IFFO1Q0D2I5 559 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 ZNF763Q0D2J5 394 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 MAP4K2Q12851 820 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 EIF2S3LQ2VIR3 472 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 RFTN2Q52LD8 501 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 CMPK2Q5EBM0 449 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 PIGGQ5H8A4 983 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 EXOSC6Q5RKV6 272 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 FNDC7Q5VTL7 733 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 SLC25A25Q6KCM7 469 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 NPSR1Q6W5P4 371 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 PAGE2Q7Z2X7 111 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 GALNT12Q8IXK2 581 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 CYP4Z2PQ8N1L4 340 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 BCORP1Q8N888 145 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 PSD4Q8NDX1 1056 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 C16orf52Q8NHV5 167 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 TWIST2Q8WVJ9 160 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 HOXB13Q92826 284 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 KLHL29Q96CT2 875 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 PELOQ9BRX2 385 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 OLAHQ9NV23 265 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 TAS2R7Q9NYW3 318 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 EHD3Q9NZN3 535 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms