RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 OR10H2O60403 315 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 SLC35E2P0CK97 266 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 NT5EP21589 574 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 MC3RP41968 323 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 MRPS35P82673 323 aaKnown RBP22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 NKG7Q16617 165 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 FAM198BQ6UWH4 519 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 DGAT2L6Q6ZPD8 337 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 ARPINQ7Z6K5 226 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 ZFP90Q8TF47 636 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 FKBP10Q96AY3 582 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 THUMPD3Q9BV44 507 aaKnown RBP22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 DENND2DQ9H6A0 471 aaPredicted RBP22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 TPT1P8Q9HAU6 139 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 SEMA3GQ9NS98 782 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 C14orf105Q9NVL8 296 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 GMPR2Q9P2T1 348 aaKnown RBP22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 ABCD2Q9UBJ2 740 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 NUP214P35658 2090 aaPredicted RBP22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 PTPRBP23467 1997 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 CLIC1O00299 241 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 SORBS2O94875 1100 aaKnown RBP22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 DLGAP3O95886 979 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 UQCRC2P22695 453 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 GABREP78334 506 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 CPZQ66K79 652 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 TIPARPQ7Z3E1 657 aaKnown RBP22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 SZRD1Q7Z422 152 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 ULK2Q8IYT8 1036 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 ANKRA2Q9H9E1 313 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 PCDHGA8Q9Y5G5 932 aa22.51■■□□□ 1.19
ATPAF1-213ENST00000574428 IGKV3D-11A0A0A0MRZ8 115 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 VSTM2BA6NLU5 285 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 RECKO95980 971 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 CHI3L1P36222 383 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 CEACAM7Q14002 265 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 MRPL14Q6P1L8 145 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 C6orf15Q6UXA7 325 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ANGPTL8Q6UXH0 198 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ZNF517Q6ZMY9 492 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 TMPRSS7Q7RTY8 843 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ST13P4Q8IZP2 240 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ELP4Q96EB1 424 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 FAM120BQ96EK7 910 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 DGAT2Q96PD7 388 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 SPRY4Q9C004 299 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 SLC26A1Q9H2B4 701 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 POLR1BQ9H9Y6 1135 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 GPN3Q9UHW5 284 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ALBP02768 609 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 IFNA16P05015 189 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 CCT3P49368 545 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 CASP9P55211 416 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ZNF628Q5EBL2 1059 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 PIGGQ5H8A4 983 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 FAM111BQ6SJ93 734 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 C10orf111Q8N326 155 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 FAM156AQ8NDB6 213 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 OR7G2Q8NG99 324 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 RBM18Q96H35 190 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 SPSB2Q99619 263 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 PIF1Q9H611 641 aa22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 ZCCHC3Q9NUD5 404 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-213ENST00000574428 PRORSD1PA6NEY8 169 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 IDSB3KWA1 339 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 C9J4A7 227 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 SOX18P35713 384 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 STT3AP46977 705 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 TP53BP2Q13625 1128 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 SERTAD2Q14140 314 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 NSDHLQ15738 373 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 PRICKLE4Q2TBC4 344 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 SAMD4BQ5PRF9 694 aaKnown RBP22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 FAM69BQ5VUD6 431 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 FAAH2Q6GMR7 532 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 HPS6Q86YV9 775 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 SH3GL1Q99961 368 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 EPS8L2Q9H6S3 715 aa22.49■■□□□ 1.19
ATPAF1-213ENST00000574428 CT62P0C5K7 136 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 TCN1P20061 433 aaPredicted RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 MSX2P35548 267 aaPredicted RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 LIPEQ05469 1076 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 TMEM64Q6YI46 380 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 FBXW8Q8N3Y1 598 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 SIMC1Q8NDZ2 872 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 CCDC124Q96CT7 223 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 WDR54Q9H977 334 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 MAT2BQ9NZL9 334 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 PADI1Q9ULC6 663 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 TCRBV16S1A1N1A0A5B0 115 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 EVPLLA8MZ36 301 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 HEXBP07686 556 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 CCNYL3P0C7X3 344 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 PRKAG1P54619 331 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 MGAT2Q10469 447 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 NCF4Q15080 339 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 TRMT12Q53H54 448 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 SAXO2Q658L1 398 aa22.48■■□□□ 1.19
ATPAF1-213ENST00000574428 PGM2L1Q6PCE3 622 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms