RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ANGPTL8Q6UXH0 198 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PLEKHM3Q6ZWE6 761 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 UBE3DQ7Z6J8 389 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 GRAMD2AQ8IUY3 354 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 SRFBP1Q8NEF9 429 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 FAM83FQ8NEG4 500 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 RDH11Q8TC12 318 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 SPPL2AQ8TCT8 520 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ZPLD1Q8TCW7 415 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 NTNG2Q96CW9 530 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ZFP3Q96NJ6 502 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 SORBS1Q9BX66 1292 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ANGPTL4Q9BY76 406 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 GSX2Q9BZM3 304 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PITHD1Q9GZP4 211 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ACBD3Q9H3P7 528 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 RPF2Q9H7B2 306 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 DNAJC11Q9NVH1 559 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 WWOXQ9NZC7 414 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 CTNNAL1Q9UBT7 734 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF490Q9ULM2 529 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 OARD1Q9Y530 152 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 EXPH5Q8NEV8 1989 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 USF3Q68DE3 2245 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 C2orf92A0A1B0GVN3 265 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 A8MXE2 369 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 ACTL6AO96019 429 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF37AP17032 561 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 KRT15P19012 456 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 HIST1H1TP22492 207 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 MC3RP41968 323 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 SLC6A12P48065 614 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 ATP5J2P56134 94 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 SLC37A1P57057 533 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 RPP38P78345 283 aaKnown RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 IGLV3-21P80748 117 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 CDKL1Q00532 357 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 SLAMF1Q13291 335 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 TNK1Q13470 666 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 GAB1Q13480 694 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 DOC2AQ14183 400 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 HIST2H2ACQ16777 129 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 SPANXN3Q5MJ09 141 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 FNDC7Q5VTL7 733 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 C18orf63Q68DL7 685 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 HIST2H2AA3Q6FI13 130 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 P4HA3Q7Z4N8 544 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 C7orf57Q8NEG2 295 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 OR1J4Q8NGS1 313 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 OR14L1PQ8NHC6 308 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 TMEM171Q8WVE6 324 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 RIT1Q92963 219 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 WNT2BQ93097 391 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 RHBDF1Q96CC6 855 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 CERS2Q96G23 380 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 CFAP36Q96G28 342 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 PDLIM5Q96HC4 596 aaKnown RBP11.09□□□□□ -0.63
PRPF8-208ENST00000573716 VPS39Q96JC1 886 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 CAPS2Q9BXY5 557 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 METTL7AQ9H8H3 244 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 MAPRE3Q9UPY8 281 aa11.09□□□□□ -0.63
PRPF8-208ENST00000573716 ROS1P08922 2347 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 RAI1Q7Z5J4 1906 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 A0A1W2PNV4 684 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 GLOD5A6NK44 160 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 OR6C76A6NM76 312 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 RNF223E7ERA6 249 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 PRAMEF4O60810 478 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TGFB1P01137 390 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 CRYGSP22914 178 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 PTPN6P29350 595 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TLX1P31314 330 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 SSTR4P31391 388 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 CD79BP40259 229 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 CASP3P42574 277 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 KCNJ5P48544 419 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 HSPA7P48741 367 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 STARP49675 285 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TMED10P49755 219 aaKnown RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 RAP1GDS1P52306 607 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 NRG3P56975 720 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 KRTAP1-1Q07627 177 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 PCDH1Q08174 1060 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 DDX39BQ13838 428 aaKnown RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 VEZF1Q14119 521 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 HP1BP3Q5SSJ5 553 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-208ENST00000573716 PRAMEF9Q5VWM5 478 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TIGD3Q6B0B8 471 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 ENPP6Q6UWR7 440 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 ADAMTSL2Q86TH1 951 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 TMEM139Q8IV31 216 aa11.08□□□□□ -0.64
PRPF8-208ENST00000573716 CNTN4Q8IWV2 1026 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms