RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RIT1Q92963 219 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 NCLNQ969V3 563 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 TSSK3Q96PN8 268 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPAIN-213ENST00000573577 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 MAPRE3Q9UPY8 281 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
RPAIN-213ENST00000573577 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-213ENST00000573577 WASHC1A8K0Z3 465 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 A8MUI8 341 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ATP1B1P05026 303 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 LBPP18428 481 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 NTSP30990 170 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 HPCAL1P37235 193 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ZNF169Q14929 603 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ACER2Q5QJU3 275 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 IL23RQ5VWK5 629 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ATCAYQ86WG3 371 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 TICAM1Q8IUC6 712 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 GALNT12Q8IXK2 581 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 LIX1Q8N485 282 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 APCDD1LQ8NCL9 501 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 SLC2A12Q8TD20 617 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 HAS2Q92819 552 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 UCN3Q969E3 161 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 EXOSC8Q96B26 276 aaKnown RBP12.6□□□□□ -0.39
RPAIN-213ENST00000573577 PPWD1Q96BP3 646 aaKnown RBP12.6□□□□□ -0.39
RPAIN-213ENST00000573577 MTERF3Q96E29 417 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ZNF764Q96H86 408 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-213ENST00000573577 FBXL20Q96IG2 436 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ZNF354BQ96LW1 612 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 BBS4Q96RK4 519 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 C1orf50Q9BV19 199 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 RNF32Q9H0A6 362 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 CLMPQ9H6B4 373 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 SLC35C2Q9NQQ7 365 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 ASIC5Q9NY37 505 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 STMN3Q9NZ72 180 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 GIMAP2Q9UG22 337 aa12.6□□□□□ -0.39
RPAIN-213ENST00000573577 TRBV11-1A0A0K0K1C0 115 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 TBX19O60806 448 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 ZFAND5O76080 213 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 TGDSO95455 350 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 DDAH2O95865 285 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 WDPCPO95876 746 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 NT5EP21589 574 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 TACR1P25103 407 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 MPIP34949 423 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 FEN1P39748 380 aaKnown RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 TNFSF10P50591 281 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 GPR143P51810 404 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 MEP1AQ16819 746 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 FCRLBQ6BAA4 426 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 OGFOD2Q6N063 350 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 LGI4Q8N135 537 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 KIF2BQ8N4N8 673 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CATSPER1Q8NEC5 780 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 OR5L2Q8NGL0 311 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 OR8K3Q8NH51 312 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 GFM2Q969S9 779 aaKnown RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CNRIP1Q96F85 164 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 SENP5Q96HI0 755 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 EGLN2Q96KS0 407 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CNPPD1Q9BV87 410 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 CXorf21Q9HAI6 301 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 SLCO1B3Q9NPD5 702 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 PLA2G3Q9NZ20 509 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 BAIAP2L1Q9UHR4 511 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
RPAIN-213ENST00000573577 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 OR5H15A6NDH6 313 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 SDHDO14521 159 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 FCHO1O14526 889 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 AKAP10O43572 662 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 SLITRK5O94991 958 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 LRATO95237 230 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 F10P00742 488 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 PRPS1L1P21108 318 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF267Q14586 743 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-213ENST00000573577 CEBPEQ15744 281 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 NXNQ6DKJ4 435 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 FAM47EQ6ZV65 393 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ACAD11Q709F0 780 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 SPATA19Q7Z5L4 167 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 RPS19BP1Q86WX3 136 aaKnown RBP12.58□□□□□ -0.4
RPAIN-213ENST00000573577 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms