RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 FAM69BQ5VUD6 431 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 GRHL3Q8TE85 626 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 GEMIN6Q8WXD5 167 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 SLC45A3Q96JT2 553 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 SLC38A2Q96QD8 506 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 INPP5KQ9BT40 448 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 TEX10Q9NXF1 929 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 PCDHB14Q9Y5E9 798 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 PTGES3LE9PB15 166 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 KPNA4O00629 521 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 PRAMEF2O60811 474 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CPNE3O75131 537 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 BCAS2O75934 225 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 APOA1P02647 267 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ALDOCP09972 364 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 POU2F1P14859 743 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 GPX3P22352 226 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CCL7P80098 99 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 SF3A2Q15428 464 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 PAGE3Q5JUK9 113 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 OR2T11Q8NH01 316 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 PROKR1Q8TCW9 393 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 DACH2Q96NX9 599 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 NUDT22Q9BRQ3 303 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 PPIEQ9UNP9 301 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 HNRNPCL2B2RXH8 293 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 HCRTR2O43614 444 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 OR6B1O95007 311 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 CXCR1P25024 350 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 RBBP4Q09028 425 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 RFX4Q33E94 735 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 TMEM71Q6P5X7 295 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 MSANTD1Q6ZTZ1 278 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 SH2D5Q6ZV89 423 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 PIGXQ8TBF5 258 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 PTGES2Q9H7Z7 377 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 MKLN1Q9UL63 735 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 LOC105369274A0A096LPK9 316 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 LOC102723532A0A0G2JNH3 316 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 LRIT2A6NDA9 550 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 LCMT2O60294 686 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 FAM20BO75063 409 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 SOX30O94993 753 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 TPP2P29144 1249 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 NR0B1P51843 470 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 RAB38P57729 211 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ROR2Q01974 943 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 PPP1R8Q12972 351 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 CYBRD1Q53TN4 286 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ABHD17BQ5VST6 288 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 DHRS13Q6UX07 377 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 GALNT5Q7Z7M9 940 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 SATL1Q86VE3 508 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ZNF595Q8IYB9 648 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 OR4N4Q8N0Y3 316 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 SLC22A8Q8TCC7 542 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 LRTOMTQ8WZ04 291 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 CENPNQ96H22 339 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 OR4K3Q96R72 315 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 GPN2Q9H9Y4 310 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 POMT2Q9UKY4 750 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 AHCYL1O43865 530 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 CNOT3O75175 753 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 CSTAP01040 98 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 TCN2P20062 427 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 RGS19P49795 217 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 ACTR3P61158 418 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 RCAN2Q14206 197 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 NKAIN1Q4KMZ8 207 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 C18orf63Q68DL7 685 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 VN1R5Q7Z5H4 357 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 C8orf59Q8N0T1 100 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 ZNF347Q96SE7 839 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 APC2O95996 2303 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 A0A1B0GX78 115 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 A6NL46 340 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 PLPP1O14494 284 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 KLK8O60259 260 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 STX11O75558 287 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 DIRAS1O95057 198 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 HMGN2P05204 90 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 SBK3P0C264 359 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 GIPC3Q8TF64 312 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 GTPBP3Q969Y2 492 aaKnown RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 SPRTNQ9H040 489 aaPredicted RBP9.55□□□□□ -0.88
SMG6-213ENST00000573166 TUBB1Q9H4B7 451 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 NT5DC2Q9H857 520 aa9.55□□□□□ -0.88
SMG6-213ENST00000573166 ZNF229Q9UJW7 825 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms