RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PELI2Q9HAT8 420 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 LRTM1Q9HBL6 345 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 ARL15Q9NXU5 204 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 EHD3Q9NZN3 535 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 CNIH4Q9P003 139 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 IKBKGQ9Y6K9 419 aa6.48□□□□□ -1.37
SMG6-205ENST00000570659 ANKRD33BA6NCL7 494 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 NPEPPSL1A6NEC2 478 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 GLOD5A6NK44 160 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 SDR42E2A6NKP2 422 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 C16orf97H3BN30 126 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 DYRK3O43781 588 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 B3GALT2O43825 422 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 SSX4O60224 188 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZIC3O60481 467 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 RAMP1O60894 148 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ENO3P13929 434 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZNF708P17019 499 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ATP5A1P25705 553 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 MSH2P43246 934 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 STT3AP46977 705 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 HNRNPH2P55795 449 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 RPS4XP62701 263 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 IRX1P78414 480 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 OCRLQ01968 901 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 DUSP2Q05923 314 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 STX4Q12846 297 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZNF267Q14586 743 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZNF460Q14592 562 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 RPS6KA2Q15349 733 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 TRIP13Q15645 432 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 EXOC3L2Q2M3D2 409 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 TTLL9Q3SXZ7 439 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 PDLIM3Q53GG5 364 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 FAM120AOSQ5T036 256 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 OR5M10Q6IEU7 315 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 STAC2Q6ZMT1 411 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 SDCCAG8Q86SQ7 713 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 MEX3DQ86XN8 651 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZNF619Q8N2I2 560 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 OR2L5Q8NG80 312 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 OR10H5Q8NGA6 315 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 OR5L2Q8NGL0 311 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 TMEM41AQ96HV5 264 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 FBXL20Q96IG2 436 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 PANX2Q96RD6 677 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 NPAS1Q99742 590 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 TMEM79Q9BSE2 394 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 HAUS8Q9BT25 410 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 NPLQ9BXD5 320 aaPredicted RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 BEX2Q9BXY8 128 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 FAM129AQ9BZQ8 928 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 RTN4RQ9BZR6 473 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 OR2B2Q9GZK3 357 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 NAT10Q9H0A0 1025 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 EHD1Q9H4M9 534 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 CXorf56Q9H5V9 222 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 CHODLQ9H9P2 273 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 CLK4Q9HAZ1 481 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 INTS10Q9NVR2 710 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 ZNF226Q9NYT6 803 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 MOCS1Q9NZB8 636 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 WWOXQ9NZC7 414 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 KLHL42Q9P2K6 505 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 FETUBQ9UGM5 382 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 FBXO5Q9UKT4 447 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMG6-205ENST00000570659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMG6-205ENST00000570659 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
SMG6-205ENST00000570659 VWFP04275 2813 aa6.47□□□□□ -1.37
SMG6-205ENST00000570659 SYCE3A1L190 88 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 SHISA8B8ZZ34 492 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 GOLGA8MH3BSY2 632 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 TAPBPO15533 448 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 OR10H2O60403 315 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 ICOSLGO75144 302 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 VENTXO95231 258 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 GAS8O95995 478 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 C8GP07360 202 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 ABCB1P08183 1280 aaPredicted RBP6.46□□□□□ -1.38
SMG6-205ENST00000570659 S1PR1P21453 382 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 SLC6A12P48065 614 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 MASP1P48740 699 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 NPY2RP49146 381 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 MTTPP55157 894 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 CASP9P55211 416 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 CLDN20P56880 219 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 BASP1P80723 227 aaKnown RBP6.46□□□□□ -1.38
SMG6-205ENST00000570659 VLDLRP98155 873 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 GPS1Q13098 491 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 DHX34Q14147 1143 aaKnown RBP6.46□□□□□ -1.38
SMG6-205ENST00000570659 RCAN2Q14206 197 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 CYP1B1Q16678 543 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 CTU2Q2VPK5 515 aaKnown RBP6.46□□□□□ -1.38
SMG6-205ENST00000570659 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
SMG6-205ENST00000570659 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms