RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZNF441Q8N8Z8 693 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 ZFP62Q8NB50 900 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-220ENST00000569916 GOLM1Q8NBJ4 401 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 POGLUT1Q8NBL1 392 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 KLHL29Q96CT2 875 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 FAM111AQ96PZ2 611 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 GAL3ST4Q96RP7 486 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 EBPLQ9BY08 206 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SHCBP1LQ9BZQ2 653 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SIRT5Q9NXA8 310 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 NPIPA1Q9UND3 350 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 DLGAP4Q9Y2H0 992 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 A0A0G2JMM0 328 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 A0A1W2PPB8 328 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 GNG14A0A1W2PPG7 69 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 A0A1W2PRS3 328 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 PINLYPA6NC86 204 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 GOLGA6L10A6NI86 522 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 KIR3DP1A8MWS1 328 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 TRIM13O60858 407 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 IL3P08700 152 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 CREB1P16220 341 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 S1PR1P21453 382 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 NT5EP21589 574 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ALDH3A1P30838 453 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 PTGER1P34995 402 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
CNOT1-220ENST00000569916 SOX18P35713 384 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 FEN1P39748 380 aaKnown RBP12.04□□□□□ -0.48
CNOT1-220ENST00000569916 RFC3P40938 356 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ALDH9A1P49189 494 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 BTKQ06187 659 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF844Q08AG5 666 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 PRICKLE4Q2TBC4 344 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF791Q3KP31 576 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-220ENST00000569916 KRTCAP3Q53RY4 240 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 CLEC6AQ6EIG7 209 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 FAM180BQ6P0A1 224 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 FJX1Q86VR8 437 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 CHERPQ8IWX8 916 aaKnown RBP12.04□□□□□ -0.48
CNOT1-220ENST00000569916 SLC15A4Q8N697 577 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF615Q8N8J6 731 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 OR2M7Q8NG81 312 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 C16orf52Q8NHV5 167 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 TCP10LQ8TDR4 215 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 C16orf78Q8WTQ4 265 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 CNRIP1Q96F85 164 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF681Q96N22 645 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 TRMOQ9BU70 441 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 MECRQ9BV79 373 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 MAT2BQ9NZL9 334 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 UTS2RQ9UKP6 389 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 CCL27Q9Y4X3 112 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 DOPEY1Q5JWR5 2465 aa12.04□□□□□ -0.48
CNOT1-220ENST00000569916 NCKAP5O14513 1909 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 C2orf92A0A1B0GVN3 265 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 G3V3Y1 287 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 TFECO14948 347 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 ASNA1O43681 348 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 TYROBPO43914 113 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SLC19A2O60779 497 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 CRCPO75575 148 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 RSL1D1O76021 490 aaKnown RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 ANXA4P09525 319 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 CCL3P10147 92 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 UROSP10746 265 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 GP1BBP13224 206 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 DRD2P14416 443 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 CSNK2A2P19784 350 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 CA7P43166 264 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 GSTM5P46439 218 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 HSF1Q00613 529 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 RBPJQ06330 500 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 MGAT2Q10469 447 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 DUSP8Q13202 625 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 LTB4RQ15722 352 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 KRT71Q3SY84 523 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SPDYAQ5MJ70 313 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 C6orf163Q5TEZ5 329 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 LRRC25Q8N386 305 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 VWA5B2Q8N398 1253 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 RELTQ969Z4 430 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SPACA9Q96E40 222 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SMC6Q96SB8 1091 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 BRINP2Q9C0B6 783 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 OR10A5Q9H207 317 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 PLEKHB1Q9UF11 243 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF639Q9UID6 485 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 PSME2Q9UL46 239 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 PTGDR2Q9Y5Y4 395 aa12.03□□□□□ -0.48
CNOT1-220ENST00000569916 SPTAN1Q13813 2472 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms