RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZBED6CLQ96FA7 236 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 VMP1Q96GC9 406 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 SENP5Q96HI0 755 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 FBXL20Q96IG2 436 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 THOC3Q96J01 351 aaKnown RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 ART5Q96L15 291 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 AMDHD1Q96NU7 426 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 ZBTB18Q99592 522 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 ELAC2Q9BQ52 826 aaKnown RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 DUSP26Q9BV47 211 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 BHLHE41Q9C0J9 482 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 OR8D2Q9GZM6 311 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 GLIPR2Q9H4G4 154 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 ACSS1Q9NUB1 689 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 COPG1Q9Y678 874 aaKnown RBP15.61■□□□□ 0.09
COMMD4-224ENST00000568877 ZZEF1O43149 2961 aa15.61■□□□□ 0.09
COMMD4-224ENST00000568877 A6NL46 340 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 HRKO00198 91 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 DNAJB5O75953 348 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 CT62P0C5K7 136 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 GPX3P22352 226 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ITGA3P26006 1051 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ATP4BP51164 291 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 CLCN2P51788 898 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 SQLEQ14534 574 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 DPY19L1Q2PZI1 675 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF628Q5EBL2 1059 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 JMJD6Q6NYC1 403 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-224ENST00000568877 FAM111BQ6SJ93 734 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 VWA5B2Q8N398 1253 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF321PQ8N8H1 164 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 GLB1L3Q8NCI6 653 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-224ENST00000568877 APCDD1LQ8NCL9 501 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 OR8J2Q8NGG1 315 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 OR9A2Q8NGT5 310 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ZFP28Q8NHY6 868 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF675Q8TD23 568 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF721Q8TF20 911 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 EXTL1Q92935 676 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 LHPPQ9H008 270 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 MAT2BQ9NZL9 334 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 ERVK-19Q9WJR5 959 aa15.6■□□□□ 0.09
COMMD4-224ENST00000568877 A0A1W2PRB8 838 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 C9JVG2 144 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 IGKV3-11P04433 115 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 ITGAMP11215 1152 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 KIR3DL1P43629 444 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 MANFP55145 182 aaKnown RBP15.59■□□□□ 0.09
COMMD4-224ENST00000568877 FUT7Q11130 342 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 MLC1Q15049 377 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 FAM174BQ3ZCQ3 159 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 SPANXN4Q5MJ08 99 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 IRAK1BP1Q5VVH5 260 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 OR4F3Q6IEY1 312 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 PAOXQ6QHF9 649 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF551Q7Z340 670 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-224ENST00000568877 KIF2BQ8N4N8 673 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 OR9I1Q8NGQ6 314 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 KAT2AQ92830 837 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 CTHRC1Q96CG8 243 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 NUDT9Q9BW91 350 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 SEMA4CQ9C0C4 833 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 EPN3Q9H201 632 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF385DQ9H6B1 395 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 COPS7AQ9UBW8 275 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF639Q9UID6 485 aa15.59■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF223Q9UK11 482 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-224ENST00000568877 LOC400499M0QZD8 3231 aa15.58■□□□□ 0.09
COMMD4-224ENST00000568877 TRBV11-1A0A0K0K1C0 115 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SNX3O60493 162 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SHOX2O60902 331 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 CEACAM4O75871 244 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SLITRK5O94991 958 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 EFNA1P20827 205 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 S1PR1P21453 382 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SSTR4P31391 388 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 S100A3P33764 101 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 GPC1P35052 558 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SOX18P35713 384 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 DGKQP52824 942 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 WNT3P56703 355 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 MRPS35P82673 323 aaKnown RBP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 HSPB3Q12988 150 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 TRMT12Q53H54 448 aaKnown RBP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 ANXA8L1Q5VT79 327 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 FDCSPQ8NFU4 85 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 OR7G1Q8NGA0 311 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 BRIX1Q8TDN6 353 aaKnown RBP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 OR5P2Q8WZ92 322 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 PSMF1Q92530 271 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 ERP27Q96DN0 273 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 RABEP2Q9H5N1 569 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.58■□□□□ 0.08
COMMD4-224ENST00000568877 TMEM45AQ9NWC5 275 aa15.58■□□□□ 0.08
COMMD4-224ENST00000568877 FAM234BA2RU67 622 aa15.57■□□□□ 0.08
COMMD4-224ENST00000568877 A8MUI8 341 aa15.57■□□□□ 0.08
COMMD4-224ENST00000568877 PLOD2O00469 737 aa15.57■□□□□ 0.08
COMMD4-224ENST00000568877 RNASET2O00584 256 aaKnown RBP15.57■□□□□ 0.08
COMMD4-224ENST00000568877 PLOD3O60568 738 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms