RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ITGA10O75578 1167 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 OR2J2O76002 312 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 CLPSP04118 112 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 JUNP05412 331 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 S1PR1P21453 382 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 SOX18P35713 384 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 RPL14P50914 215 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 RPL38P63173 70 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF763Q0D2J5 394 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 OR1C1Q15619 314 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 LTB4RQ15722 352 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 SPRED3Q2MJR0 410 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 C6orf136Q5SQH8 315 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF227Q86WZ6 799 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 TICAM1Q8IUC6 712 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 C9orf40Q8IXQ3 194 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 LGI4Q8N135 537 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 SIMC1Q8NDZ2 872 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 GFM2Q969S9 779 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 FBXL20Q96IG2 436 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 FCRL1Q96LA6 429 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 SH3GL2Q99962 352 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 BRINP2Q9C0B6 783 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 MYNNQ9NPC7 610 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 KLHL1Q9NR64 748 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 ASF1BQ9NVP2 202 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 LRFN1Q9P244 771 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 MYOTQ9UBF9 498 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
CNOT1-213ENST00000568158 YARS2Q9Y2Z4 477 aaKnown RBP12.07□□□□□ -0.48
CNOT1-213ENST00000568158 J3QKU1 62 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 FCHO1O14526 889 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 AKAP10O43572 662 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 PRAMEF2O60811 474 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 NEURL1O76050 574 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 LRATO95237 230 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SDC1P18827 310 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 DDCP20711 480 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 GSTM5P46439 218 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 HLCSP50747 726 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SSR4P51571 173 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SLC37A1P57057 533 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 FUT7Q11130 342 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 MAP4K2Q12851 820 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 PDCD2Q16342 344 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-213ENST00000568158 TRMT12Q53H54 448 aaKnown RBP12.06□□□□□ -0.48
CNOT1-213ENST00000568158 XKR7Q5GH72 579 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 PIGGQ5H8A4 983 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF766Q5HY98 468 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SLC25A25Q6KCM7 469 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 RPUSD3Q6P087 351 aaKnown RBP12.06□□□□□ -0.48
CNOT1-213ENST00000568158 IL20RBQ6UXL0 311 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 GALNT12Q8IXK2 581 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 TMEM156Q8N614 296 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF615Q8N8J6 731 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 MDS2Q8NDY4 140 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 OR8K3Q8NH51 312 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 CLHC1Q8NHS4 586 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SUN3Q8TAQ9 357 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 MIB2Q96AX9 1013 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 TUBGCP3Q96CW5 907 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 ART5Q96L15 291 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 PPP3R2Q96LZ3 170 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 TSSK3Q96PN8 268 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 MANSC1Q9H8J5 431 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 SLC35C2Q9NQQ7 365 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 MAT2BQ9NZL9 334 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 EML6Q6ZMW3 1958 aa12.06□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF462Q96JM2 2506 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 OR6B1O95007 311 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 ATP1B1P05026 303 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 SP1P08047 785 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 BCKDHAP12694 445 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 TRHRP34981 398 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 CYB561P49447 251 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 FOXK1P85037 733 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 EXOSC7Q15024 291 aaKnown RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 MAPKAPK3Q16644 382 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 IL23RQ5VWK5 629 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 ANKRD26P1Q6NSI1 321 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 LRRC25Q8N386 305 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 NUDT8Q8WV74 236 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 ZNF75CPQ92670 426 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 KAT2AQ92830 837 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 TAAR6Q96RI8 345 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 BBS4Q96RK4 519 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 RASL10BQ96S79 203 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 C1orf50Q9BV19 199 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 OR10A5Q9H207 317 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 TRIM45Q9H8W5 580 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-213ENST00000568158 ANKRA2Q9H9E1 313 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 THAP1Q9NVV9 213 aa12.05□□□□□ -0.48
CNOT1-213ENST00000568158 EHD3Q9NZN3 535 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms