RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CDONQ4KMG0 1287 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 USP45Q70EL2 814 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 GLRX5Q86SX6 157 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 GHDCQ8N2G8 530 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 NATD1Q8N6N6 113 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 PCSK9Q8NBP7 692 aaKnown RBP14.87□□□□□ -0.03
COMMD4-215ENST00000566843 OR4M2Q8NGB6 313 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 MED8Q96G25 268 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 GALNT9Q9HCQ5 603 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 A4GALTQ9NPC4 353 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ELF5Q9UKW6 265 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-215ENST00000566843 SPEF1Q9Y4P9 236 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ASB4Q9Y574 426 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 IRGMA1A4Y4 181 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ADAM12O43184 909 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 PLOD3O60568 738 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 PRKACBP22694 351 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 EVI2BP34910 448 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 SPINT3P49223 89 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 TUFMP49411 452 aaKnown RBP14.87□□□□□ -0.03
COMMD4-215ENST00000566843 DGKGP49619 791 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ACLYP53396 1101 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 MADCAM1Q13477 382 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ANGPT1Q15389 498 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 ZBTB37Q5TC79 503 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 KIAA1211LQ6NV74 962 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 UFD1Q92890 307 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 CREB3L1Q96BA8 519 aa14.87□□□□□ -0.03
COMMD4-215ENST00000566843 SMIM30A4D0T7 59 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 INMT-MINDY4F8WBC2 141 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 GREM1O60565 184 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 RFPL3O75679 317 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CHRM5P08912 532 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 IMPA1P29218 277 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SOAT1P35610 550 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SLC11A1P49279 550 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CAV3P56539 151 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SMIM11AP58511 58 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 COX10Q12887 443 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 PCM1Q15154 2024 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CCSMST1Q4G0I0 132 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 RPS26P11Q5JNZ5 115 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 TOR2AQ5JU69 321 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 METTL3Q86U44 580 aaKnown RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 IQCF1Q8N6M8 205 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CELF5Q8N6W0 485 aaKnown RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 OR2AP1Q8NGE2 309 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 WDR48Q8TAF3 677 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 WDR34Q96EX3 536 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 TM9SF2Q99805 663 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 FAM83CQ9BQN1 747 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 NARFLQ9H6Q4 476 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CCDC88CQ9P219 2028 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 NUP50Q9UKX7 468 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ICKQ9UPZ9 632 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ITM2BQ9Y287 266 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 PIPSLA2A3N6 862 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 QSOX1O00391 747 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 NPC1O15118 1278 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SOD1P00441 154 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ACP2P11117 423 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 TNNI3P19429 210 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 CDK5Q00535 292 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 RAB40BQ12829 278 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ELAVL2Q12926 359 aaKnown RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 DSG2Q14126 1118 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 OR2G6Q5TZ20 316 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 PRSS55Q6UWB4 352 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 TAS1R1Q7RTX1 841 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 FAM20CQ8IXL6 584 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 LSMEM1Q8N8F7 131 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SLC37A3Q8NCC5 494 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ZNF485Q8NCK3 441 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SLC38A5Q8WUX1 472 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 SENP5Q96HI0 755 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-215ENST00000566843 LRR1Q96L50 414 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 NT5DC2Q9H857 520 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 MAT2BQ9NZL9 334 aa14.86□□□□□ -0.03
COMMD4-215ENST00000566843 ANAPC1Q9H1A4 1944 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 LOC102723532A0A0G2JNH3 316 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 AGRPO00253 132 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 MEN1O00255 615 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 CASKO14936 926 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 LRRTM2O43300 516 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 SLC22A5O76082 557 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 GBAP04062 536 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 POLR2CP19387 275 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 POU3F3P20264 500 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 AGFG1P52594 562 aaKnown RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 IL18Q14116 193 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 GINS1Q14691 196 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 OR4D11Q8NGI4 311 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 NEIL2Q969S2 332 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 ARHGAP9Q9BRR9 750 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 NLNQ9BYT8 704 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 SUV39H2Q9H5I1 410 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 RERGLQ9H628 205 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 CXorf36Q9H7Y0 433 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 C12orf10Q9HB07 376 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 FOLH1BQ9HBA9 442 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms