RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 HMX2A2RU54 273 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 STX16-NPEPL1H3BU86 382 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 HRKO00198 91 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 STX16O14662 325 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 TMPRSS11DO60235 418 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 ALDOAP04075 364 aaKnown RBP25.46■■□□□ 1.67
UBFD1-206ENST00000566669 ARL1P40616 181 aaPredicted RBP25.46■■□□□ 1.67
UBFD1-206ENST00000566669 RPS6KA2Q15349 733 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 UAP1Q16222 522 aaPredicted RBP25.46■■□□□ 1.67
UBFD1-206ENST00000566669 TSNAXIP1Q2TAA8 658 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 TMEM198Q66K66 360 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 DGAT2L6Q6ZPD8 337 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 GALNT12Q8IXK2 581 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 RNF175Q8N4F7 328 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 GPR78Q96P69 363 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 CXorf21Q9HAI6 301 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 SEMA4BQ9NPR2 832 aaPredicted RBP25.46■■□□□ 1.67
UBFD1-206ENST00000566669 RNF11Q9Y3C5 154 aa25.46■■□□□ 1.67
UBFD1-206ENST00000566669 INTS1Q8N201 2190 aaKnown RBP25.46■■□□□ 1.67
UBFD1-206ENST00000566669 HSPB2A8KAH6 182 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 AIFM1O95831 613 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 CELA3AP09093 270 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 COL6A2P12110 1019 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 CD1EP15812 388 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 SERPINB9P50453 376 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 NR0B1P51843 470 aaKnown RBP25.45■■□□□ 1.66
UBFD1-206ENST00000566669 CCNG1P51959 295 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 MYBPHQ13203 477 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 HSPB2Q16082 182 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 TECRLQ5HYJ1 363 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 FRG2Q64ET8 278 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 RTL6Q6ICC9 239 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 SYT10Q6XYQ8 523 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 OR7G1Q8NGA0 311 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 OR10G3Q8NGC4 313 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 FRG2BQ96QU4 278 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 ZDHHC18Q9NUE0 388 aa25.45■■□□□ 1.66
UBFD1-206ENST00000566669 CNOT11Q9UKZ1 510 aaKnown RBP25.45■■□□□ 1.66
UBFD1-206ENST00000566669 A0A0G2JNJ9 132 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 AHRRA9YTQ3 701 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 FUT7Q11130 342 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 IFT88Q13099 833 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 TRADDQ15628 312 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 PRAMEF20Q5VT98 475 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 TTC19Q6DKK2 380 aaPredicted RBP25.44■■□□□ 1.66
UBFD1-206ENST00000566669 ZNF441Q8N8Z8 693 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 OR4K14Q8NGD5 310 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 TRPC4APQ8TEL6 797 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 ISL2Q96A47 359 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 FUT8Q9BYC5 575 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 VPS11Q9H270 941 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 NOL11Q9H8H0 719 aaKnown RBP25.44■■□□□ 1.66
UBFD1-206ENST00000566669 Q9UFV3 132 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 CFL2Q9Y281 166 aa25.44■■□□□ 1.66
UBFD1-206ENST00000566669 HCFC1P51610 2035 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 LRRC3CA6NJW4 275 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 GLOD5A6NK44 160 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 SMIM24O75264 130 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 PRKRAO75569 313 aaKnown RBP25.43■■□□□ 1.66
UBFD1-206ENST00000566669 INHBAP08476 426 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 CNTFP26441 200 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 GGTA1PQ4G0N0 100 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 PACS2Q86VP3 889 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 PM20D2Q8IYS1 436 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 PTGR2Q8N8N7 351 aaPredicted RBP25.43■■□□□ 1.66
UBFD1-206ENST00000566669 DIO2Q92813 273 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 MRRFQ96E11 262 aaKnown RBP25.43■■□□□ 1.66
UBFD1-206ENST00000566669 PROK2Q9HC23 129 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 ALKBH4Q9NXW9 302 aa25.43■■□□□ 1.66
UBFD1-206ENST00000566669 TRIM3O75382 744 aaPredicted RBP25.42■■□□□ 1.66
UBFD1-206ENST00000566669 KRT38O76015 456 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 ZWINTO95229 277 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 SIX3O95343 332 aaPredicted RBP25.42■■□□□ 1.66
UBFD1-206ENST00000566669 NEK2P51955 445 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 TMEM200AQ86VY9 491 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 ULK2Q8IYT8 1036 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 JSRP1Q96MG2 331 aaPredicted RBP25.42■■□□□ 1.66
UBFD1-206ENST00000566669 NMRK1Q9NWW6 199 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 SPRR3Q9UBC9 169 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 EDARQ9UNE0 448 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 NPFFR2Q9Y5X5 522 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 AKAP9Q99996 3911 aa25.42■■□□□ 1.66
UBFD1-206ENST00000566669 LRRC14BA6NHZ5 514 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 GOLGA6L10A6NI86 522 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 RFPL3SP0C7P2 107 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 NAGAP17050 411 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 ENDOUP21128 410 aaKnown RBP25.41■■□□□ 1.66
UBFD1-206ENST00000566669 GDF1P27539 372 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 SLC44A1Q8WWI5 657 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 ELOVL6Q9H5J4 265 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 PCTPQ9UKL6 214 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 PSME2Q9UL46 239 aa25.41■■□□□ 1.66
UBFD1-206ENST00000566669 ESYT3A0FGR9 886 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 OR7A17O14581 309 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 DVL2O14641 736 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 OTCP00480 354 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 CLPSP04118 112 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 KRT15P19012 456 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 MAGEA12P43365 314 aa25.4■■□□□ 1.66
UBFD1-206ENST00000566669 XKP51811 444 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms