RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	IFNGR1	P15260	489 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	HIST1H1T	P22492	207 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CXCR2	P25025	360 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TRHR	P34981	398 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	BSG	P35613	385 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	GRK3	P35626	688 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	DCT	P40126	519 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	MSH2	P43246	934 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CORO7	P57737	925 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	OR4D2	P58180	307 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	RPS13	P62277	151 aa	Known RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CAV1	Q03135	178 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	DUSP8	Q13202	625 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	OR1C1	Q15619	314 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	UAP1	Q16222	522 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	INA	Q16352	499 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ZNF766	Q5HY98	468 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	FHL5	Q5TD97	284 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	SH2D5	Q6ZV89	423 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	SPATC1	Q76KD6	591 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ABHD13	Q7L211	337 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	GALNTL5	Q7Z4T8	443 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	C9orf40	Q8IXQ3	194 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	LGI4	Q8N135	537 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TCAIM	Q8N3R3	496 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	RPRML	Q8N4K4	120 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	MARVELD2	Q8N4S9	558 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ACOT4	Q8N9L9	421 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	L3MBTL4	Q8NA19	623 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	SIMC1	Q8NDZ2	872 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	B3GNT7	Q8NFL0	401 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	HUS1B	Q8NHY5	278 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ZNF721	Q8TF20	911 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ITLN2	Q8WWU7	325 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TM9SF4	Q92544	642 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CDKL2	Q92772	493 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	DIO2	Q92813	273 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	NCLN	Q969V3	563 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	NTNG2	Q96CW9	530 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	LPAR4	Q99677	370 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	NPL	Q9BXD5	320 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TRIM54	Q9BYV2	358 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	REXO4	Q9GZR2	422 aa	Known RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CDCP1	Q9H5V8	836 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	KCNK13	Q9HB14	408 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	PROK2	Q9HC23	129 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	SH2D2A	Q9NP31	389 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TNFRSF12A	Q9NP84	129 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	KLHL1	Q9NR64	748 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	FARSB	Q9NSD9	589 aa	Known RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	MBNL3	Q9NUK0	354 aa	Known RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	OLAH	Q9NV23	265 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ERVK13-1	Q9NX77	482 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TEX10	Q9NXF1	929 aa	Predicted RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	CD274	Q9NZQ7	290 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ABI3	Q9P2A4	366 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	OSGIN2	Q9Y236	505 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ZNF835	Q9Y2P0	537 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ZNF281	Q9Y2X9	895 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	RNF11	Q9Y3C5	154 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TSC22D4	Q9Y3Q8	395 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ATG4B	Q9Y4P1	393 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	MMACHC	Q9Y4U1	282 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ASB4	Q9Y574	426 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	PCDHGB6	Q9Y5F9	930 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	LIPG	Q9Y5X9	500 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ITPR3	Q14573	2671 aa		5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	ANK3	Q12955	4377 aa	Known RBP	5.99	□□□□□ -1.45
TCF4-233	ENST00000566376	TRBV23-1	A0A0A0MS06	115 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	TRBV11-1	A0A0K0K1C0	115 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376		A8MT66	165 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376		A8MUI8	341 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	TRIM49D1	C9J1S8	452 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376		H0YIV9	168 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	C19orf84	I3L1E1	186 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	LRRTM2	O43300	516 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	RIPK2	O43353	540 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	OR6B1	O95007	311 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	AIFM1	O95831	613 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	HPX	P02790	462 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	CT62	P0C5K7	136 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	TSPAN8	P19075	237 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	IL10	P22301	178 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	GSTM2	P28161	218 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	PTGER1	P34995	402 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	RFC3	P40938	356 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	CA7	P43166	264 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	HTR6	P50406	440 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	SERPINB8	P50452	374 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	NEK2	P51955	445 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	MTTP	P55157	894 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	GFRA1	P56159	465 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	TNFRSF17	Q02223	184 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	IRF8	Q02556	426 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	CKAP4	Q07065	602 aa	Known RBP	5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	GALNT1	Q10472	559 aa	Predicted RBP	5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	LAPTM5	Q13571	262 aa		5.98	□□□□□ -1.45
TCF4-233	ENST00000566376	TERF2	Q15554	542 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms